Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL606753.1-201ENST00000427435 87 ntBASIC0.93□□□□□ -2.26
SIX4Q9UIU6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.93□□□□□ -2.26
SIX4Q9UIU6 MIR18B-201ENST00000454574 71 ntBASIC0.93□□□□□ -2.26
SIX4Q9UIU6 MIR4452-201ENST00000583004 71 ntBASIC0.93□□□□□ -2.26
SIX4Q9UIU6 AL359881.1-201ENST00000602916 267 ntBASIC0.93□□□□□ -2.26
SIX4Q9UIU6 AC023934.1-201ENST00000574529 2389 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 RNU6-949P-201ENST00000384040 107 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 U8.15-201ENST00000390947 134 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 SNORD67.1-201ENST00000516618 108 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 RNU7-6P-201ENST00000516845 62 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 MIR3163-201ENST00000581592 73 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 AC020891.4-201ENST00000605745 93 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 AC087741.2-201ENST00000619415 172 ntBASIC0.92□□□□□ -2.26
SIX4Q9UIU6 Y_RNA.346-201ENST00000365385 112 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 RNU6-1168P-201ENST00000390831 104 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 RNA5SP247-201ENST00000411181 105 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 AC096949.1-201ENST00000412047 152 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 RPS26P5-201ENST00000418544 335 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 RNU7-185P-201ENST00000459215 60 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 U2.22-201ENST00000636441 106 ntBASIC0.91□□□□□ -2.26
SIX4Q9UIU6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.353-201ENST00000365440 108 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 RNU6-616P-201ENST00000384353 107 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 MIR100-201ENST00000385259 80 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 SNORD89-201ENST00000390981 114 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 MIR1257-201ENST00000408490 117 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 MIR1287-201ENST00000408492 90 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 MIR1827-201ENST00000408549 66 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 RPL39P25-201ENST00000449384 154 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 AC067940.1-201ENST00000458411 300 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 RPS29P1-201ENST00000465274 159 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 RNU6-62P-201ENST00000516526 102 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 RNU7-137P-201ENST00000516788 62 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 MIR4676-201ENST00000583078 72 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.9□□□□□ -2.27
SIX4Q9UIU6 U6.95-201ENST00000636931 70 ntBASIC0.9□□□□□ -2.27
SIX4Q9UIU6 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 MIR759-201ENST00000390224 91 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 RNU6-1154P-201ENST00000391001 104 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 SNORD77B-201ENST00000391112 67 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 RNU6-479P-201ENST00000516348 105 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.773-201ENST00000607168 90 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 AC105081.1-201ENST00000617727 106 ntBASIC0.89□□□□□ -2.27
SIX4Q9UIU6 MIR1-1-201ENST00000362147 71 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 RNA5SP205-201ENST00000364653 136 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.344-201ENST00000365381 112 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.563-201ENST00000384707 108 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 MIR206-201ENST00000384872 86 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 MIR548D2-201ENST00000384955 97 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 RNU6-1307P-201ENST00000391012 103 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 SNORD93-201ENST00000408813 74 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 RNU2-51P-201ENST00000410708 197 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.649-201ENST00000459077 103 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
SIX4Q9UIU6 MIR1255B1-201ENST00000636325 63 ntBASIC0.88□□□□□ -2.27
SIX4Q9UIU6 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SIX4Q9UIU6 MIR548A1-201ENST00000385041 97 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 MIR125B2-201ENST00000385128 89 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 PDCD5P2-201ENST00000507570 312 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 RNU6-313P-201ENST00000516317 112 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 MIR4804-201ENST00000581683 73 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 AL035470.1-201ENST00000622571 220 ntBASIC0.87□□□□□ -2.27
SIX4Q9UIU6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SIX4Q9UIU6 SNORD114-10-201ENST00000363409 72 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.362-201ENST00000365518 110 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 MIR548A3-201ENST00000385297 97 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 RNU4-83P-201ENST00000410863 133 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.86□□□□□ -2.27
SIX4Q9UIU6 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 RNU6-977P-201ENST00000516411 103 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 AL670379.3-201ENST00000605040 251 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 RMST_2.1-201ENST00000617263 136 ntBASIC0.86□□□□□ -2.27
SIX4Q9UIU6 RNY4P6-201ENST00000363667 96 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.224-201ENST00000364308 111 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.448-201ENST00000384185 108 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 MIR520F-201ENST00000384824 87 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SIX4Q9UIU6 RNU6-1321P-201ENST00000390905 107 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 RNU7-2P-201ENST00000516096 62 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms