Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MIR6516-201ENST00000630554 81 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 AL162726.3-218ENST00000636401 95 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
DKK3Q9UBP4 SNORA63.5-201ENST00000363548 123 ntBASIC1.38□□□□□ -2.19
DKK3Q9UBP4 MIR563-201ENST00000385080 79 ntBASIC1.38□□□□□ -2.19
DKK3Q9UBP4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.38□□□□□ -2.19
DKK3Q9UBP4 AC068339.1-201ENST00000526965 141 ntBASIC1.38□□□□□ -2.19
DKK3Q9UBP4 MIR151B-201ENST00000584249 96 ntBASIC1.38□□□□□ -2.19
DKK3Q9UBP4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
DKK3Q9UBP4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
DKK3Q9UBP4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
DKK3Q9UBP4 RNU6-363P-201ENST00000362895 105 ntBASIC1.37□□□□□ -2.19
DKK3Q9UBP4 RNU6-153P-201ENST00000364422 104 ntBASIC1.37□□□□□ -2.19
DKK3Q9UBP4 RNU6-580P-201ENST00000365159 107 ntBASIC1.37□□□□□ -2.19
DKK3Q9UBP4 RNU6-1014P-201ENST00000383940 103 ntBASIC1.37□□□□□ -2.19
DKK3Q9UBP4 MIR5009-201ENST00000578736 100 ntBASIC1.37□□□□□ -2.19
DKK3Q9UBP4 Y_RNA.773-201ENST00000607168 90 ntBASIC1.37□□□□□ -2.19
DKK3Q9UBP4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.37□□□□□ -2.19
DKK3Q9UBP4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
DKK3Q9UBP4 AL391516.1-201ENST00000554380 2449 ntBASIC1.37□□□□□ -2.19
DKK3Q9UBP4 Y_RNA.178-201ENST00000363832 102 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 U8.6-201ENST00000364939 135 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 SNORA32-201ENST00000384072 121 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 RNU6-106P-201ENST00000384405 107 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 AC048334.1-201ENST00000477975 159 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 RNU7-79P-201ENST00000516082 62 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 FAM71BP1-201ENST00000604431 523 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 SEPT14P17-201ENST00000617978 177 ntBASIC1.36□□□□□ -2.19
DKK3Q9UBP4 SNORA63.4-201ENST00000362763 126 ntBASIC1.35□□□□□ -2.19
DKK3Q9UBP4 RNU6-616P-201ENST00000384353 107 ntBASIC1.35□□□□□ -2.19
DKK3Q9UBP4 MIR588-201ENST00000384900 83 ntBASIC1.35□□□□□ -2.19
DKK3Q9UBP4 RNU6-816P-201ENST00000390914 107 ntBASIC1.35□□□□□ -2.19
DKK3Q9UBP4 RNU6-1268P-201ENST00000391214 107 ntBASIC1.35□□□□□ -2.19
DKK3Q9UBP4 RNU6-1239P-201ENST00000391310 107 ntBASIC1.35□□□□□ -2.19
DKK3Q9UBP4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
DKK3Q9UBP4 RNU7-40P-201ENST00000516397 64 ntBASIC1.35□□□□□ -2.19
DKK3Q9UBP4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.35□□□□□ -2.19
DKK3Q9UBP4 Y_RNA.507-201ENST00000384500 99 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 MIR1302-5-201ENST00000408164 150 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 RNA5SP237-201ENST00000410414 113 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 AC141846.1-201ENST00000568348 142 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 AL662814.1-201ENST00000617364 121 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 MIR1255B1-201ENST00000636325 63 ntBASIC1.34□□□□□ -2.19
DKK3Q9UBP4 Y_RNA.78-201ENST00000362970 110 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 SNORD114-10-201ENST00000363409 72 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 Y_RNA.163-201ENST00000363702 113 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 RNU4-67P-201ENST00000364569 141 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 RNU6-554P-201ENST00000410466 106 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 MRPL35P3-201ENST00000421557 364 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 MIR6740-201ENST00000618268 113 ntBASIC1.33□□□□□ -2.2
DKK3Q9UBP4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 RNY1P13-201ENST00000365030 105 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 SNORD115-35-201ENST00000365122 82 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 RNU6-409P-201ENST00000384114 104 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 RPL39P25-201ENST00000449384 154 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 AL031737.1-201ENST00000450125 223 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 RPS29P1-201ENST00000465274 159 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 RNU6-1018P-201ENST00000516577 106 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 MIR6788-201ENST00000618842 66 ntBASIC1.32□□□□□ -2.2
DKK3Q9UBP4 MIR30D-201ENST00000362283 70 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-654P-201ENST00000364373 107 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU1-93P-201ENST00000364704 169 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-147P-201ENST00000383983 107 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-949P-201ENST00000384040 107 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-1113P-201ENST00000384348 107 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 SNORA80D-201ENST00000384488 135 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-447P-201ENST00000410293 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-355P-201ENST00000410427 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-791P-201ENST00000410467 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-705P-201ENST00000410601 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-733P-201ENST00000410759 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-860P-201ENST00000410860 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-785P-201ENST00000411324 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU7-62P-201ENST00000458856 62 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU7-2P-201ENST00000516096 62 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU6-521P-201ENST00000516663 105 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 RNU7-137P-201ENST00000516788 62 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 uc_338.28-201ENST00000612082 187 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 U6.90-201ENST00000614007 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 U6.70-201ENST00000620287 104 ntBASIC1.31□□□□□ -2.2
DKK3Q9UBP4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 MIR520E-201ENST00000384867 87 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 MT-TF-201ENST00000387314 71 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 RNU6-205P-201ENST00000390858 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms