Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORA32-201ENST00000384072 121 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 U8.15-201ENST00000390947 134 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 RNU6-394P-201ENST00000410735 107 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 AL512326.2-201ENST00000426359 151 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 MIR3671-201ENST00000580455 88 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
HCN3Q9P1Z3 RNU6-886P-201ENST00000384319 105 ntBASIC0.72□□□□□ -2.29
HCN3Q9P1Z3 AL603914.1-201ENST00000401964 204 ntBASIC0.72□□□□□ -2.29
HCN3Q9P1Z3 RNU7-164P-201ENST00000459221 62 ntBASIC0.72□□□□□ -2.29
HCN3Q9P1Z3 RNU7-79P-201ENST00000516082 62 ntBASIC0.72□□□□□ -2.29
HCN3Q9P1Z3 MIR3612-201ENST00000579753 87 ntBASIC0.72□□□□□ -2.29
HCN3Q9P1Z3 SNORD92-201ENST00000585078 85 ntBASIC0.72□□□□□ -2.29
HCN3Q9P1Z3 RNY1P13-201ENST00000365030 105 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 RNU6-949P-201ENST00000384040 107 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 SNORA72.6-201ENST00000384520 129 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.580-201ENST00000391004 95 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 AC108059.2-201ENST00000434626 151 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.651-201ENST00000459380 103 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 SNORA25.12-201ENST00000516202 82 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 RNU2-35P-201ENST00000516446 142 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 MIR3144-201ENST00000579460 79 ntBASIC0.71□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.398-201ENST00000383952 99 ntBASIC0.7□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.7□□□□□ -2.3
HCN3Q9P1Z3 RNU6-460P-201ENST00000391158 108 ntBASIC0.7□□□□□ -2.3
HCN3Q9P1Z3 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
HCN3Q9P1Z3 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
HCN3Q9P1Z3 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
HCN3Q9P1Z3 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
HCN3Q9P1Z3 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 PCNPP3-201ENST00000393579 471 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 AC098479.1-201ENST00000609225 154 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 MIR6513-201ENST00000621188 64 ntBASIC0.69□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 SNORD115-2-201ENST00000362842 82 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 RNU6-915P-201ENST00000364943 103 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 SNORD115-20-201ENST00000365099 82 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 RNA5SP117-201ENST00000365294 118 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 RNU7-123P-201ENST00000515911 60 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 MIR4491-201ENST00000581087 68 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 MIR548AE2-201ENST00000583456 67 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 MIR924-201ENST00000638017 53 ntBASIC0.68□□□□□ -2.3
HCN3Q9P1Z3 MIR18A-201ENST00000362310 71 ntBASIC0.67□□□□□ -2.3
HCN3Q9P1Z3 RNU6-448P-201ENST00000517052 107 ntBASIC0.67□□□□□ -2.3
HCN3Q9P1Z3 RNU7-35P-201ENST00000517174 62 ntBASIC0.67□□□□□ -2.3
HCN3Q9P1Z3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.67□□□□□ -2.3
HCN3Q9P1Z3 MIR548X2-201ENST00000579776 100 ntBASIC0.67□□□□□ -2.3
HCN3Q9P1Z3 MIR8066-201ENST00000617280 78 ntBASIC0.67□□□□□ -2.3
HCN3Q9P1Z3 AC010487.4-201ENST00000637027 61 ntBASIC0.67□□□□□ -2.3
HCN3Q9P1Z3 SNORD114-23-201ENST00000363536 72 ntBASIC0.66□□□□□ -2.3
HCN3Q9P1Z3 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.66□□□□□ -2.3
HCN3Q9P1Z3 RNU7-197P-201ENST00000458836 62 ntBASIC0.66□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.692-201ENST00000516627 105 ntBASIC0.66□□□□□ -2.3
HCN3Q9P1Z3 MIR6082-201ENST00000613604 109 ntBASIC0.66□□□□□ -2.3
HCN3Q9P1Z3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 RNU6-679P-201ENST00000391003 106 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 AC002350.1-201ENST00000490759 375 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 DEFB131E-201ENST00000532329 154 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 AL137067.1-201ENST00000615933 120 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 AC021753.1-201ENST00000635724 168 ntBASIC0.65□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.215-201ENST00000364204 112 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.400-201ENST00000383963 111 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.555-201ENST00000384673 110 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 RNA5SP330-201ENST00000517096 96 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 MTND5P41-201ENST00000517498 206 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 AP001328.1-201ENST00000528550 176 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 AC108081.1-201ENST00000604358 221 ntBASIC0.64□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.63□□□□□ -2.31
HCN3Q9P1Z3 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
HCN3Q9P1Z3 SNORD67.1-201ENST00000516618 108 ntBASIC0.63□□□□□ -2.31
HCN3Q9P1Z3 SNORA25.16-201ENST00000516741 121 ntBASIC0.63□□□□□ -2.31
HCN3Q9P1Z3 AL109933.3-201ENST00000619095 188 ntBASIC0.63□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.299-201ENST00000364973 94 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 Y_RNA.420-201ENST00000384043 110 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 RNU4-69P-201ENST00000410677 143 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 AC096949.1-201ENST00000412047 152 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 RNY4P20-201ENST00000516678 93 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 MIR3668-201ENST00000582138 75 ntBASIC0.62□□□□□ -2.31
HCN3Q9P1Z3 RNA5SP133-201ENST00000363368 119 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms