Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 Y_RNA.571-201ENST00000384753 98 ntBASIC0.02□□□□□ -2.41
KLHL28Q9NXS3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.02□□□□□ -2.41
KLHL28Q9NXS3 DEFB131E-201ENST00000532329 154 ntBASIC0.02□□□□□ -2.41
KLHL28Q9NXS3 MIR4639-201ENST00000584938 69 ntBASIC0.02□□□□□ -2.41
KLHL28Q9NXS3 AC091304.10-201ENST00000641554 121 ntBASIC0.02□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.121-201ENST00000363309 113 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.562-201ENST00000384695 113 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.626-201ENST00000411288 95 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 RNU7-113P-201ENST00000459273 62 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 RNU6-135P-201ENST00000516769 101 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 U6.106-201ENST00000636360 105 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 U6.109-201ENST00000636749 87 ntBASIC0.01□□□□□ -2.41
KLHL28Q9NXS3 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.120-201ENST00000363304 110 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.145-201ENST00000363527 102 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 SNORA25.7-201ENST00000364375 127 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.288-201ENST00000364854 92 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNU6-275P-201ENST00000364910 107 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNU6-1126P-201ENST00000384002 107 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.459-201ENST00000384251 102 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNU6-738P-201ENST00000384531 106 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.515-201ENST00000384535 112 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 MIR548H3-201ENST00000408771 118 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 AC108059.2-201ENST00000434626 151 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNU6-893P-201ENST00000458841 100 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNU7-129P-201ENST00000516128 62 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNA5SP236-201ENST00000516169 116 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNA5SP33-201ENST00000516687 98 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 AC138749.4-201ENST00000563970 127 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 AL359881.1-201ENST00000602916 267 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNU1-29P-201ENST00000606574 126 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0□□□□□ -2.41
KLHL28Q9NXS3 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 RNU4-70P-201ENST00000384579 139 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 MIR568-201ENST00000385036 95 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 RNU6-127P-201ENST00000390897 107 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 SNORD67.1-201ENST00000516618 108 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 RNU7-137P-201ENST00000516788 62 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 MIR548AE2-201ENST00000583456 67 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.01□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 SNORD115-2-201ENST00000362842 82 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 RNU4-58P-201ENST00000363192 141 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 RNU6-702P-201ENST00000364982 107 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 SNORD115-20-201ENST00000365099 82 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 RNU6-768P-201ENST00000384683 107 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 MIR643-201ENST00000385267 97 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 SNORD58.1-201ENST00000391313 66 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 AL022718.1-201ENST00000412004 84 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 MIR1270-201ENST00000459320 83 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 RNU2-35P-201ENST00000516446 142 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 AC105081.1-201ENST00000617727 106 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 MIR499B-201ENST00000636498 73 ntBASIC-0.02□□□□□ -2.41
KLHL28Q9NXS3 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 SNORA63-201ENST00000363450 132 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 SNORA2A-201ENST00000383885 135 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 MIR4305-201ENST00000583252 102 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
KLHL28Q9NXS3 MIR101-2-201ENST00000362195 79 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 SNORD115-24-201ENST00000363528 82 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 RNY1P2-201ENST00000364820 117 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 RNU6-690P-201ENST00000365242 106 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 RNA5SP128-201ENST00000365305 116 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 RNU6-918P-201ENST00000391219 106 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 RPL39P34-201ENST00000477141 156 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 MIR3128-201ENST00000581957 66 ntBASIC-0.04□□□□□ -2.42
KLHL28Q9NXS3 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.05□□□□□ -2.42
KLHL28Q9NXS3 RNU6-726P-201ENST00000364680 107 ntBASIC-0.05□□□□□ -2.42
KLHL28Q9NXS3 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.05□□□□□ -2.42
KLHL28Q9NXS3 MTCYBP9-201ENST00000431021 303 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms