Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL137067.1-201ENST00000615933 120 ntBASIC0.7□□□□□ -2.3
NDE1Q9NXR1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.7□□□□□ -2.3
NDE1Q9NXR1 Y_RNA.114-201ENST00000363265 113 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 Y_RNA.298-201ENST00000364960 107 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 MIR520H-201ENST00000385126 88 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 MT-TF-201ENST00000387314 71 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 U8.15-201ENST00000390947 134 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 SNORD93-201ENST00000408813 74 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.69□□□□□ -2.3
NDE1Q9NXR1 MIR4804-201ENST00000581683 73 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 MIR3133-201ENST00000583157 78 ntBASIC0.69□□□□□ -2.3
NDE1Q9NXR1 RNU6-235P-201ENST00000362644 107 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 RNY1P13-201ENST00000365030 105 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 MIR125B2-201ENST00000385128 89 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 MTND4LP9-201ENST00000427694 174 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 MIR1270-201ENST00000459320 83 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 AC008608.1-201ENST00000603910 127 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 AL136317.1-201ENST00000612653 226 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 AP001340.1-201ENST00000624405 217 ntBASIC0.68□□□□□ -2.3
NDE1Q9NXR1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
NDE1Q9NXR1 Y_RNA.374-201ENST00000365606 101 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 Y_RNA.568-201ENST00000384742 113 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 RNU6-257P-201ENST00000410238 98 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 AC096949.1-201ENST00000412047 152 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 RNU7-102P-201ENST00000458948 62 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 RNU7-79P-201ENST00000516082 62 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 RNU7-35P-201ENST00000517174 62 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 MIR4698-201ENST00000577795 80 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 U7.2-201ENST00000607576 63 ntBASIC0.67□□□□□ -2.3
NDE1Q9NXR1 SNORD115-2-201ENST00000362842 82 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU6-403P-201ENST00000363163 104 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 SNORD115-20-201ENST00000365099 82 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 Y_RNA.343-201ENST00000365354 112 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNY1P5-201ENST00000383890 115 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU6-949P-201ENST00000384040 107 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU6-187P-201ENST00000384139 106 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU6-364P-201ENST00000384387 107 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 MIR938-201ENST00000401216 83 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU4-83P-201ENST00000410863 133 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
NDE1Q9NXR1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU7-56P-201ENST00000458744 62 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU7-156P-201ENST00000517214 74 ntBASIC0.66□□□□□ -2.3
NDE1Q9NXR1 RNU6-1062P-201ENST00000383908 107 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 SNORA72.6-201ENST00000384520 129 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
NDE1Q9NXR1 MIR1263-201ENST00000408324 86 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 AC244098.3-201ENST00000424803 96 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 RN7SKP19-201ENST00000516016 252 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 RNU6-781P-201ENST00000516377 101 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 SNORD67.1-201ENST00000516618 108 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 AC025627.3-201ENST00000582078 182 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 AL359881.1-201ENST00000602916 267 ntBASIC0.65□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.280-201ENST00000364765 112 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 MIR193B-201ENST00000384907 83 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 MT-TI-201ENST00000387365 69 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 SNORA40-201ENST00000388090 126 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 RNU1-119P-201ENST00000391122 165 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 MIR8066-201ENST00000617280 78 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 AC105081.1-201ENST00000617727 106 ntBASIC0.64□□□□□ -2.31
NDE1Q9NXR1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.64□□□□□ -2.31
NDE1Q9NXR1 MIR373-201ENST00000362273 69 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 MIR573-201ENST00000384964 99 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-447P-201ENST00000410293 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-355P-201ENST00000410427 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-791P-201ENST00000410467 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-705P-201ENST00000410601 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-860P-201ENST00000410860 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-785P-201ENST00000411324 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 AL158147.1-201ENST00000443970 75 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-1211P-201ENST00000459179 105 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.703-201ENST00000516846 111 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-971P-201ENST00000516920 106 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 MIR3973-201ENST00000579824 107 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 MIR4491-201ENST00000581087 68 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 U6.90-201ENST00000614007 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 U6.70-201ENST00000620287 104 ntBASIC0.63□□□□□ -2.31
NDE1Q9NXR1 RNU6-647P-201ENST00000364243 107 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 Y_RNA.525-201ENST00000384570 113 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 RNU4-69P-201ENST00000410677 143 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 RNA5SP222-201ENST00000411039 105 ntBASIC0.62□□□□□ -2.31
NDE1Q9NXR1 RNU6-1061P-201ENST00000516530 99 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms