Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU6-519P-201ENST00000410590 108 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 RNU4-83P-201ENST00000410863 133 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 SNORD4B-201ENST00000459083 72 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 U7.4-201ENST00000614961 63 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SMPD4Q9NXE4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-480P-201ENST00000384332 107 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-447P-201ENST00000410293 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-355P-201ENST00000410427 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-791P-201ENST00000410467 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-705P-201ENST00000410601 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU2-7P-201ENST00000410794 178 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-860P-201ENST00000410860 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP501-201ENST00000410990 112 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU6-785P-201ENST00000411324 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 RNU7-85P-201ENST00000458851 63 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 U6.90-201ENST00000614007 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 U6.70-201ENST00000620287 104 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
SMPD4Q9NXE4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 MIR424-201ENST00000362227 98 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 RNU4-32P-201ENST00000363404 141 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 RNU6-624P-201ENST00000363411 107 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 SNORD38.2-201ENST00000384470 69 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 RNU7-43P-201ENST00000516554 64 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 CYP3A52P-201ENST00000563326 91 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 AC141846.1-201ENST00000568348 142 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.88□□□□□ -2.11
SMPD4Q9NXE4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 AC131280.1-202ENST00000624067 4211 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 Y_RNA.545-201ENST00000384652 105 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 SCARNA18B-201ENST00000458806 135 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 AC005908.1-201ENST00000468701 347 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SMPD4Q9NXE4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 AP000648.3-201ENST00000623539 4507 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP276-201ENST00000362580 94 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 MIR1236-201ENST00000408340 102 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 SNORD13-201ENST00000459299 104 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 AC114801.3-201ENST00000510231 177 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 RNU7-41P-201ENST00000515917 61 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 AC090897.1-201ENST00000580909 226 ntBASIC1.86□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP465-201ENST00000391195 109 ntBASIC1.85□□□□□ -2.11
SMPD4Q9NXE4 SNRPGP12-201ENST00000449481 213 ntBASIC1.85□□□□□ -2.11
SMPD4Q9NXE4 RNA5SP458-201ENST00000516188 119 ntBASIC1.85□□□□□ -2.11
SMPD4Q9NXE4 MIR3134-201ENST00000579433 74 ntBASIC1.85□□□□□ -2.11
SMPD4Q9NXE4 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
SMPD4Q9NXE4 AL627230.6-201ENST00000611129 280 ntBASIC1.85□□□□□ -2.11
SMPD4Q9NXE4 AL662814.1-201ENST00000617364 121 ntBASIC1.85□□□□□ -2.11
SMPD4Q9NXE4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 MIRLET7A1-201ENST00000362295 80 ntBASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 MIR520C-201ENST00000385005 87 ntBASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 AL603825.1-201ENST00000438481 80 ntBASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 AC138749.4-201ENST00000563970 127 ntBASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 MIR8066-201ENST00000617280 78 ntBASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 MIR4251-201ENST00000635819 61 ntBASIC1.84□□□□□ -2.11
SMPD4Q9NXE4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 RNY1P2-201ENST00000364820 117 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 RNU6-203P-201ENST00000384038 104 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 Y_RNA.532-201ENST00000384590 113 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 SNORA17.3-201ENST00000391159 129 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 AC244023.1-201ENST00000426884 112 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 AC027119.1-201ENST00000440877 241 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 RNA5SP481-201ENST00000516814 122 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 AC133485.1-201ENST00000567176 124 ntBASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
SMPD4Q9NXE4 AC242498.1-201ENST00000604134 111 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 544.6 ms