Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 RNU4-62P-201ENST00000410125 130 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 SNORA7.5-201ENST00000410672 110 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 BTF3P4-201ENST00000418852 495 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
RLIMQ9NVW2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.21□□□□□ -2.22
RLIMQ9NVW2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
RLIMQ9NVW2 Y_RNA.155-201ENST00000363632 101 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 RNU6-816P-201ENST00000390914 107 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 U8.15-201ENST00000390947 134 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 MIR942-201ENST00000401111 86 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 RNU7-185P-201ENST00000459215 60 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 SNORD124-201ENST00000459577 104 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 AC133485.1-201ENST00000567176 124 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
RLIMQ9NVW2 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
RLIMQ9NVW2 RNU6-403P-201ENST00000363163 104 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 SNORD114-10-201ENST00000363409 72 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 RNU4-67P-201ENST00000364569 141 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 Y_RNA.507-201ENST00000384500 99 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 SNORA72.6-201ENST00000384520 129 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 SNORD20-201ENST00000384550 80 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 MIR1287-201ENST00000408492 90 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 RPS26P5-201ENST00000418544 335 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 RNU7-2P-201ENST00000516096 62 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 RNU6-521P-201ENST00000516663 105 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.19□□□□□ -2.22
RLIMQ9NVW2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RLIMQ9NVW2 MIR1-1-201ENST00000362147 71 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 RNU6-865P-201ENST00000364772 107 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 SNORD89-201ENST00000390981 114 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 RNU6-977P-201ENST00000516411 103 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 RNU6-412P-201ENST00000516434 106 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 AL162726.3-218ENST00000636401 95 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 U6.109-201ENST00000636749 87 ntBASIC1.18□□□□□ -2.22
RLIMQ9NVW2 RNU1-36P-201ENST00000365130 165 ntBASIC1.17□□□□□ -2.22
RLIMQ9NVW2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.17□□□□□ -2.22
RLIMQ9NVW2 RNU4-83P-201ENST00000410863 133 ntBASIC1.17□□□□□ -2.22
RLIMQ9NVW2 AP1B1P2-201ENST00000416196 106 ntBASIC1.17□□□□□ -2.22
RLIMQ9NVW2 MIR4679-2-201ENST00000578358 77 ntBASIC1.17□□□□□ -2.22
RLIMQ9NVW2 AC020891.4-201ENST00000605745 93 ntBASIC1.17□□□□□ -2.22
RLIMQ9NVW2 MIR7111-201ENST00000619751 72 ntBASIC1.17□□□□□ -2.22
RLIMQ9NVW2 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 Y_RNA.49-201ENST00000362714 112 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 RNA5SP133-201ENST00000363368 119 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 RNU6-1107P-201ENST00000364817 104 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 SNORD115-35-201ENST00000365122 82 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 RNU6-409P-201ENST00000384114 104 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 MIR1912-201ENST00000410389 80 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 RNU6-321P-201ENST00000410912 106 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 RPL39P34-201ENST00000477141 156 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 DEFB131E-201ENST00000532329 154 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 MIR4676-201ENST00000583078 72 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 AL512598.1-201ENST00000610158 273 ntBASIC1.16□□□□□ -2.22
RLIMQ9NVW2 Y_RNA.85-201ENST00000363014 111 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 Y_RNA.281-201ENST00000364774 94 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RLIMQ9NVW2 RNU6-364P-201ENST00000384387 107 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 SNORA40.6-201ENST00000391153 128 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 FABP5P4-201ENST00000437203 171 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 AC068339.1-201ENST00000526965 141 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 AL512310.12-203ENST00000640543 90 ntBASIC1.15□□□□□ -2.23
RLIMQ9NVW2 RNU6-363P-201ENST00000362895 105 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 U8.6-201ENST00000364939 135 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 MIR520F-201ENST00000384824 87 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 MIR605-201ENST00000385078 83 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 RNU6-733P-201ENST00000410759 104 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.14□□□□□ -2.23
RLIMQ9NVW2 RNU7-48P-201ENST00000458875 63 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 TRMT112P2-201ENST00000512910 132 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 RNU6-589P-201ENST00000516485 107 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 Y_RNA.709-201ENST00000516952 92 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 MIR4491-201ENST00000581087 68 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
RLIMQ9NVW2 RNU6-215P-201ENST00000365169 102 ntBASIC1.13□□□□□ -2.23
RLIMQ9NVW2 MIR200A-201ENST00000384875 90 ntBASIC1.13□□□□□ -2.23
RLIMQ9NVW2 MIR125B2-201ENST00000385128 89 ntBASIC1.13□□□□□ -2.23
RLIMQ9NVW2 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
RLIMQ9NVW2 MIR1827-201ENST00000408549 66 ntBASIC1.13□□□□□ -2.23
RLIMQ9NVW2 RNU7-156P-201ENST00000517214 74 ntBASIC1.13□□□□□ -2.23
RLIMQ9NVW2 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
RLIMQ9NVW2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RLIMQ9NVW2 SNORA7.1-201ENST00000363750 139 ntBASIC1.12□□□□□ -2.23
RLIMQ9NVW2 Y_RNA.328-201ENST00000365208 113 ntBASIC1.12□□□□□ -2.23
RLIMQ9NVW2 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
RLIMQ9NVW2 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms