Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.17□□□□□ -2.44
EXOSC4Q9NPD3 AP003072.1-201ENST00000531740 145 ntBASIC-0.17□□□□□ -2.44
EXOSC4Q9NPD3 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.17□□□□□ -2.44
EXOSC4Q9NPD3 MIR1273G-201ENST00000577677 100 ntBASIC-0.17□□□□□ -2.44
EXOSC4Q9NPD3 MIR5190-201ENST00000581537 80 ntBASIC-0.17□□□□□ -2.44
EXOSC4Q9NPD3 MIR548AE2-201ENST00000583456 67 ntBASIC-0.17□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 SNORD114-26-201ENST00000363543 72 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 RNU6-643P-201ENST00000384018 107 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 MIR501-201ENST00000390204 84 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 RNU7-104P-201ENST00000459398 79 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 AP001094.1-201ENST00000579805 193 ntBASIC-0.18□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 AL358176.2-201ENST00000425769 204 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 AC244505.6-201ENST00000452829 130 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 AC141557.1-201ENST00000540982 400 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 AC044792.1-201ENST00000593294 196 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 MIR8087-201ENST00000612745 78 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 AL162376.1-201ENST00000624117 175 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 U6.104-201ENST00000637979 90 ntBASIC-0.19□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 SNORD115-2-201ENST00000362842 82 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 SNORD115-20-201ENST00000365099 82 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 RNY4P28-201ENST00000365281 93 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 RNU6-652P-201ENST00000365488 107 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 RNU6-269P-201ENST00000391077 97 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 RNU2-38P-201ENST00000410856 79 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 RNU2-35P-201ENST00000516446 142 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 MIR4308-201ENST00000580634 81 ntBASIC-0.2□□□□□ -2.44
EXOSC4Q9NPD3 RNU6-797P-201ENST00000363101 109 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 RNU6-690P-201ENST00000365242 106 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 MIR613-201ENST00000385248 95 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 RNA5SP163-201ENST00000410304 99 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 MIR1270-201ENST00000459320 83 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 AC067863.3-201ENST00000624172 122 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
EXOSC4Q9NPD3 SNORD114-10-201ENST00000363409 72 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 MIR489-201ENST00000384923 84 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 RNA5SP236-201ENST00000516169 116 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 MIR5706-201ENST00000579841 80 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 MIR4305-201ENST00000583252 102 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 MIR3925-201ENST00000584674 77 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 MIR548AD-201ENST00000584780 82 ntBASIC-0.22□□□□□ -2.44
EXOSC4Q9NPD3 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 SNORD27-201ENST00000363981 72 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 MIR106A-201ENST00000384870 81 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 MIR892B-201ENST00000401279 77 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 MTND2P23-201ENST00000422990 651 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 MIR4500-201ENST00000579472 76 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 MIR548H5-201ENST00000580314 60 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 MIR4743-201ENST00000584576 69 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 U6.106-201ENST00000636360 105 ntBASIC-0.23□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 RNA5SP403-201ENST00000363598 108 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-429P-201ENST00000384582 108 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 MIR1197-201ENST00000408818 88 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 RNU7-165P-201ENST00000458864 60 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 SNORD127-201ENST00000458892 86 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 TRAJ51-201ENST00000504127 63 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 MTND1P19-201ENST00000511780 315 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-240P-201ENST00000516098 97 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 AL360085.1-201ENST00000604713 532 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 AC098479.1-201ENST00000609225 154 ntBASIC-0.24□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-161P-201ENST00000363051 106 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-275P-201ENST00000364910 107 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-768P-201ENST00000384683 107 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 MIR635-201ENST00000384830 98 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 MIR548F4-201ENST00000408515 105 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 RNU2-60P-201ENST00000517290 128 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 MIR4677-201ENST00000584153 80 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 uc_338.28-201ENST00000612082 187 ntBASIC-0.25□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.26□□□□□ -2.45
EXOSC4Q9NPD3 BX276092.1-201ENST00000427368 251 ntBASIC-0.26□□□□□ -2.45
EXOSC4Q9NPD3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms