Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU2-51P-201ENST00000410708 197 ntBASIC1.29□□□□□ -2.2
VTA1Q9NP79 RPS26P5-201ENST00000418544 335 ntBASIC1.29□□□□□ -2.2
VTA1Q9NP79 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
VTA1Q9NP79 U2.22-201ENST00000636441 106 ntBASIC1.29□□□□□ -2.2
VTA1Q9NP79 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
VTA1Q9NP79 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 SNORD115-19-201ENST00000363098 82 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 SNORD115-18-201ENST00000363293 82 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 SNORD115-17-201ENST00000364612 82 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 RNU6-1104P-201ENST00000384723 104 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 RNU6-1154P-201ENST00000391001 104 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 U7.7-201ENST00000459276 60 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 RNU6-1110P-201ENST00000516462 101 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 MIR4679-2-201ENST00000578358 77 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 AL359881.1-201ENST00000602916 267 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 FAM71BP1-201ENST00000604431 523 ntBASIC1.28□□□□□ -2.2
VTA1Q9NP79 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VTA1Q9NP79 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VTA1Q9NP79 RNY1P13-201ENST00000365030 105 ntBASIC1.27□□□□□ -2.21
VTA1Q9NP79 RNA5SP220-201ENST00000516298 104 ntBASIC1.27□□□□□ -2.21
VTA1Q9NP79 RNU7-6P-201ENST00000516845 62 ntBASIC1.27□□□□□ -2.21
VTA1Q9NP79 AL670379.3-201ENST00000605040 251 ntBASIC1.27□□□□□ -2.21
VTA1Q9NP79 RMST_2.1-201ENST00000617263 136 ntBASIC1.27□□□□□ -2.21
VTA1Q9NP79 MIR6767-201ENST00000637302 66 ntBASIC1.27□□□□□ -2.21
VTA1Q9NP79 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
VTA1Q9NP79 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
VTA1Q9NP79 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.26□□□□□ -2.21
VTA1Q9NP79 RNA5SP480-201ENST00000516840 109 ntBASIC1.26□□□□□ -2.21
VTA1Q9NP79 AC022523.2-201ENST00000561045 150 ntBASIC1.26□□□□□ -2.21
VTA1Q9NP79 AL365222.1-201ENST00000614661 98 ntBASIC1.26□□□□□ -2.21
VTA1Q9NP79 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.26□□□□□ -2.21
VTA1Q9NP79 SNORA32-201ENST00000384072 121 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 MIR520E-201ENST00000384867 87 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 MIR548D2-201ENST00000384955 97 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 MIR548A3-201ENST00000385297 97 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 MIR1257-201ENST00000408490 117 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 MIR1827-201ENST00000408549 66 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 Y_RNA.630-201ENST00000411370 108 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 MIR548AI-201ENST00000579940 88 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 AC025627.3-201ENST00000582078 182 ntBASIC1.25□□□□□ -2.21
VTA1Q9NP79 Y_RNA.353-201ENST00000365440 108 ntBASIC1.24□□□□□ -2.21
VTA1Q9NP79 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
VTA1Q9NP79 Y_RNA.649-201ENST00000459077 103 ntBASIC1.24□□□□□ -2.21
VTA1Q9NP79 RNU7-185P-201ENST00000459215 60 ntBASIC1.24□□□□□ -2.21
VTA1Q9NP79 RNU6-94P-201ENST00000607728 107 ntBASIC1.24□□□□□ -2.21
VTA1Q9NP79 AC087741.2-201ENST00000619415 172 ntBASIC1.24□□□□□ -2.21
VTA1Q9NP79 SNORA19-201ENST00000384737 128 ntBASIC1.23□□□□□ -2.21
VTA1Q9NP79 MIR548I2-201ENST00000408348 149 ntBASIC1.23□□□□□ -2.21
VTA1Q9NP79 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.23□□□□□ -2.21
VTA1Q9NP79 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.23□□□□□ -2.21
VTA1Q9NP79 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
VTA1Q9NP79 RPL39P34-201ENST00000477141 156 ntBASIC1.22□□□□□ -2.21
VTA1Q9NP79 RNU7-137P-201ENST00000516788 62 ntBASIC1.22□□□□□ -2.21
VTA1Q9NP79 MIR4771-2-201ENST00000577758 74 ntBASIC1.22□□□□□ -2.21
VTA1Q9NP79 MIR4771-1-201ENST00000582617 74 ntBASIC1.22□□□□□ -2.21
VTA1Q9NP79 AC023934.1-201ENST00000574529 2389 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VTA1Q9NP79 Y_RNA.261-201ENST00000364631 102 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 MIR125B2-201ENST00000385128 89 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 SNORD93-201ENST00000408813 74 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 SNORD83.1-201ENST00000411362 77 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 RPS29P1-201ENST00000465274 159 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 AC133485.1-201ENST00000567176 124 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
VTA1Q9NP79 RNU1-36P-201ENST00000365130 165 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 SNORA22C-201ENST00000384614 134 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 MT-TI-201ENST00000387365 69 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 U8.15-201ENST00000390947 134 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 MIR938-201ENST00000401216 83 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 RNU6-977P-201ENST00000516411 103 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 RNU6-412P-201ENST00000516434 106 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 AC007012.1-201ENST00000567192 175 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 uc_338.6-201ENST00000613544 171 ntBASIC1.2□□□□□ -2.22
VTA1Q9NP79 Y_RNA.98-201ENST00000363109 102 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 Y_RNA.273-201ENST00000364703 102 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 SNORD115-35-201ENST00000365122 82 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 RNU6-1056P-201ENST00000383996 107 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 MIR1912-201ENST00000410389 80 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 RNU7-2P-201ENST00000516096 62 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 RNU6-1194P-201ENST00000516208 104 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 SNORD67.1-201ENST00000516618 108 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 MIR4676-201ENST00000583078 72 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.19□□□□□ -2.22
VTA1Q9NP79 RNU6-1144P-201ENST00000384247 104 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 RNU6-880P-201ENST00000384526 107 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 Y_RNA.525-201ENST00000384570 113 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.18□□□□□ -2.22
VTA1Q9NP79 MIR1270-201ENST00000459320 83 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 snoU13.21-201ENST00000459368 105 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 SNORD33.1-201ENST00000516213 88 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 RNU6-765P-201ENST00000516916 99 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 MIR4804-201ENST00000581683 73 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 MIR151B-201ENST00000584249 96 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 AC022709.1-201ENST00000615967 87 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
VTA1Q9NP79 RNU6-363P-201ENST00000362895 105 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 Y_RNA.85-201ENST00000363014 111 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms