Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
POLR1BQ9H9Y6 U8.15-201ENST00000390947 134 ntBASIC0.61□□□□□ -2.31
POLR1BQ9H9Y6 AC002350.1-201ENST00000490759 375 ntBASIC0.61□□□□□ -2.31
POLR1BQ9H9Y6 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
POLR1BQ9H9Y6 RNU6-765P-201ENST00000516916 99 ntBASIC0.61□□□□□ -2.31
POLR1BQ9H9Y6 MIR4305-201ENST00000583252 102 ntBASIC0.61□□□□□ -2.31
POLR1BQ9H9Y6 Y_RNA.42-201ENST00000362660 108 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 Y_RNA.171-201ENST00000363760 102 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 AL603914.1-201ENST00000401964 204 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 AC092628.1-201ENST00000436250 252 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 RNU6-1258P-201ENST00000516911 111 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 RNU7-35P-201ENST00000517174 62 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 AC008608.1-201ENST00000603910 127 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 MIR8066-201ENST00000617280 78 ntBASIC0.6□□□□□ -2.31
POLR1BQ9H9Y6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 Y_RNA.251-201ENST00000364551 99 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 Y_RNA.258-201ENST00000364613 105 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 RNY1P13-201ENST00000365030 105 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 Y_RNA.580-201ENST00000391004 95 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 RN7SKP12-201ENST00000516275 143 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 RNU2-60P-201ENST00000517290 128 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 AC112693.2-201ENST00000556538 232 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 AC133485.4-201ENST00000561835 220 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 AC138907.4-201ENST00000570107 226 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 MIR8087-201ENST00000612745 78 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 MIR3658-201ENST00000636291 56 ntBASIC0.59□□□□□ -2.31
POLR1BQ9H9Y6 MIR330-201ENST00000362196 94 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.85-201ENST00000363014 111 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 RNA5SP117-201ENST00000365294 118 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.531-201ENST00000384589 121 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 RNU7-79P-201ENST00000516082 62 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 AL109933.3-201ENST00000619095 188 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
POLR1BQ9H9Y6 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
POLR1BQ9H9Y6 RNA5SP33-201ENST00000516687 98 ntBASIC0.57□□□□□ -2.32
POLR1BQ9H9Y6 AC021443.1-201ENST00000604478 211 ntBASIC0.57□□□□□ -2.32
POLR1BQ9H9Y6 MIR6082-201ENST00000613604 109 ntBASIC0.57□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.299-201ENST00000364973 94 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-449P-201ENST00000383914 107 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.470-201ENST00000384307 117 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 AC098934.3-201ENST00000430450 190 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 MIR4491-201ENST00000581087 68 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.778-201ENST00000620203 90 ntBASIC0.56□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-403P-201ENST00000363163 104 ntBASIC0.55□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-716P-201ENST00000365621 103 ntBASIC0.55□□□□□ -2.32
POLR1BQ9H9Y6 AC096949.1-201ENST00000412047 152 ntBASIC0.55□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-240P-201ENST00000516098 97 ntBASIC0.55□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-1194P-201ENST00000516208 104 ntBASIC0.55□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.690-201ENST00000516603 95 ntBASIC0.55□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
POLR1BQ9H9Y6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.13-201ENST00000362403 112 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 RNU4-11P-201ENST00000365287 132 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 AL512326.2-201ENST00000426359 151 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 RNU7-164P-201ENST00000459221 62 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 RNU2-35P-201ENST00000516446 142 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 uc_338.16-201ENST00000621804 95 ntBASIC0.54□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-394P-201ENST00000410735 107 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.651-201ENST00000459380 103 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-135P-201ENST00000516769 101 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 RNU6-794P-201ENST00000517261 64 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 FTX_2.1-201ENST00000618816 94 ntBASIC0.53□□□□□ -2.32
POLR1BQ9H9Y6 RNA5SP257-201ENST00000363023 116 ntBASIC0.52□□□□□ -2.33
POLR1BQ9H9Y6 AC074198.2-201ENST00000508153 258 ntBASIC0.52□□□□□ -2.33
POLR1BQ9H9Y6 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
POLR1BQ9H9Y6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.68-201ENST00000362881 102 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 SNORD114-10-201ENST00000363409 72 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 RNY1P11-201ENST00000363759 113 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 RNU6-151P-201ENST00000364158 107 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 RNU6-309P-201ENST00000364573 106 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.270-201ENST00000364693 104 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 RNU7-197P-201ENST00000458836 62 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 RNU6-469P-201ENST00000516253 101 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 MIR548AE2-201ENST00000583456 67 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 AC243829.6-201ENST00000612652 106 ntBASIC0.51□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.298-201ENST00000364960 107 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 SNORA72.6-201ENST00000384520 129 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 MIR513C-201ENST00000401352 84 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 MIR1197-201ENST00000408818 88 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 RNU4-69P-201ENST00000410677 143 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.617-201ENST00000410920 90 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.686-201ENST00000516548 134 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 MIR3678-201ENST00000578455 94 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 AC098479.1-201ENST00000609225 154 ntBASIC0.5□□□□□ -2.33
POLR1BQ9H9Y6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms