Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 RNU7-121P-201ENST00000516604 62 ntBASIC0.53□□□□□ -2.32
SH2D4AQ9H788 MIR6082-201ENST00000613604 109 ntBASIC0.53□□□□□ -2.32
SH2D4AQ9H788 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SH2D4AQ9H788 RNA5SP117-201ENST00000365294 118 ntBASIC0.52□□□□□ -2.33
SH2D4AQ9H788 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
SH2D4AQ9H788 RNU6-1086P-201ENST00000410930 100 ntBASIC0.52□□□□□ -2.33
SH2D4AQ9H788 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
SH2D4AQ9H788 RNU7-120P-201ENST00000459334 63 ntBASIC0.52□□□□□ -2.33
SH2D4AQ9H788 RN7SKP12-201ENST00000516275 143 ntBASIC0.52□□□□□ -2.33
SH2D4AQ9H788 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
SH2D4AQ9H788 RNU6-682P-201ENST00000363843 106 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 SNORA72.6-201ENST00000384520 129 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 SNORD37.2-201ENST00000391075 66 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 AL512326.2-201ENST00000426359 151 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 RNU7-79P-201ENST00000516082 62 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 RNU6-240P-201ENST00000516098 97 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 RNA5SP33-201ENST00000516687 98 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 AP003327.1-201ENST00000529684 127 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 MIR1273G-201ENST00000577677 100 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 DNAJC19P2-201ENST00000593340 302 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 AC092634.7-201ENST00000621022 103 ntBASIC0.51□□□□□ -2.33
SH2D4AQ9H788 Y_RNA.120-201ENST00000363304 110 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 SNORA32-201ENST00000384072 121 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 MTATP6P21-201ENST00000440681 189 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 RNU2-35P-201ENST00000516446 142 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 RNU7-35P-201ENST00000517174 62 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 MIR3678-201ENST00000578455 94 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 AC011603.4-201ENST00000611325 277 ntBASIC0.5□□□□□ -2.33
SH2D4AQ9H788 SNORD115-2-201ENST00000362842 82 ntBASIC0.49□□□□□ -2.33
SH2D4AQ9H788 RNU6-508P-201ENST00000363231 103 ntBASIC0.49□□□□□ -2.33
SH2D4AQ9H788 SNORD115-20-201ENST00000365099 82 ntBASIC0.49□□□□□ -2.33
SH2D4AQ9H788 RNU6-1318P-201ENST00000365389 103 ntBASIC0.49□□□□□ -2.33
SH2D4AQ9H788 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
SH2D4AQ9H788 Y_RNA.662-201ENST00000516028 97 ntBASIC0.49□□□□□ -2.33
SH2D4AQ9H788 RNU6-765P-201ENST00000516916 99 ntBASIC0.49□□□□□ -2.33
SH2D4AQ9H788 MIR4305-201ENST00000583252 102 ntBASIC0.49□□□□□ -2.33
SH2D4AQ9H788 Y_RNA.29-201ENST00000362570 113 ntBASIC0.48□□□□□ -2.33
SH2D4AQ9H788 RNA5SP517-201ENST00000364724 117 ntBASIC0.48□□□□□ -2.33
SH2D4AQ9H788 Y_RNA.441-201ENST00000384123 112 ntBASIC0.48□□□□□ -2.33
SH2D4AQ9H788 SNORA25.16-201ENST00000516741 121 ntBASIC0.48□□□□□ -2.33
SH2D4AQ9H788 SNORA81.3-201ENST00000517283 198 ntBASIC0.48□□□□□ -2.33
SH2D4AQ9H788 AC133485.4-201ENST00000561835 220 ntBASIC0.48□□□□□ -2.33
SH2D4AQ9H788 Y_RNA.257-201ENST00000364596 102 ntBASIC0.47□□□□□ -2.33
SH2D4AQ9H788 Y_RNA.651-201ENST00000459380 103 ntBASIC0.47□□□□□ -2.33
SH2D4AQ9H788 AC138907.4-201ENST00000570107 226 ntBASIC0.47□□□□□ -2.33
SH2D4AQ9H788 MIR548AE2-201ENST00000583456 67 ntBASIC0.47□□□□□ -2.33
SH2D4AQ9H788 AC021443.1-201ENST00000604478 211 ntBASIC0.47□□□□□ -2.33
SH2D4AQ9H788 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
SH2D4AQ9H788 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SH2D4AQ9H788 Y_RNA.32-201ENST00000362589 110 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.531-201ENST00000384589 121 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 MIR644A-201ENST00000385262 94 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.584-201ENST00000391090 114 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 AC074198.2-201ENST00000508153 258 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.686-201ENST00000516548 134 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.700-201ENST00000516806 100 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 AC004792.1-201ENST00000614523 137 ntBASIC0.46□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.251-201ENST00000364551 99 ntBASIC0.45□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.272-201ENST00000364696 102 ntBASIC0.45□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.567-201ENST00000384736 106 ntBASIC0.45□□□□□ -2.34
SH2D4AQ9H788 RNU6-1135P-201ENST00000411083 103 ntBASIC0.45□□□□□ -2.34
SH2D4AQ9H788 SNORA25.12-201ENST00000516202 82 ntBASIC0.45□□□□□ -2.34
SH2D4AQ9H788 MTND5P34-201ENST00000568888 325 ntBASIC0.45□□□□□ -2.34
SH2D4AQ9H788 uc_338.16-201ENST00000621804 95 ntBASIC0.45□□□□□ -2.34
SH2D4AQ9H788 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
SH2D4AQ9H788 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 RNU6-309P-201ENST00000364573 106 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 SNORD18B-201ENST00000365659 72 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.785-201ENST00000384290 109 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 RNU6-291P-201ENST00000384720 107 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 RNU7-164P-201ENST00000459221 62 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 RNU7-123P-201ENST00000515911 60 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 SNORA31.14-201ENST00000516728 116 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 MIR924-201ENST00000638017 53 ntBASIC0.44□□□□□ -2.34
SH2D4AQ9H788 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SH2D4AQ9H788 RNU4-11P-201ENST00000365287 132 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 SNORA8.2-201ENST00000384372 139 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.536-201ENST00000384621 113 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 MIR518A1-201ENST00000385068 85 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
SH2D4AQ9H788 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 MIR1270-201ENST00000459320 83 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 RNU6-469P-201ENST00000516253 101 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.690-201ENST00000516603 95 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 SNORD67.1-201ENST00000516618 108 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 Y_RNA.697-201ENST00000516776 113 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 AC112693.2-201ENST00000556538 232 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 AL359881.1-201ENST00000602916 267 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 SNORA25.18-201ENST00000607153 114 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.43□□□□□ -2.34
SH2D4AQ9H788 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.42□□□□□ -2.34
SH2D4AQ9H788 RNA5SP133-201ENST00000363368 119 ntBASIC0.42□□□□□ -2.34
SH2D4AQ9H788 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
SH2D4AQ9H788 RNU6-535P-201ENST00000384722 107 ntBASIC0.42□□□□□ -2.34
SH2D4AQ9H788 AL603914.1-201ENST00000401964 204 ntBASIC0.42□□□□□ -2.34
SH2D4AQ9H788 SNORD71-201ENST00000411292 86 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms