Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-1006P-201ENST00000516998 103 ntBASIC1.45□□□□□ -2.18
EBF3Q9H4W6 RNU7-35P-201ENST00000517174 62 ntBASIC1.45□□□□□ -2.18
EBF3Q9H4W6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.45□□□□□ -2.18
EBF3Q9H4W6 FAM71BP1-201ENST00000604431 523 ntBASIC1.45□□□□□ -2.18
EBF3Q9H4W6 MIR494-201ENST00000349529 81 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.95-201ENST00000363079 95 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.190-201ENST00000363964 101 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 SNORD115-35-201ENST00000365122 82 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 SNORA18-201ENST00000384416 132 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 MIR1276-201ENST00000408707 83 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 RNA5SP261-201ENST00000410536 106 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 AC245047.7-201ENST00000440265 293 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 RNU6-322P-201ENST00000516010 103 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 RNU7-43P-201ENST00000516554 64 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 RNU6-1018P-201ENST00000516577 106 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 MIR376B-201ENST00000614515 100 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 MIR7111-201ENST00000619751 72 ntBASIC1.44□□□□□ -2.18
EBF3Q9H4W6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.43□□□□□ -2.18
EBF3Q9H4W6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.10-201ENST00000362371 110 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.17-201ENST00000362433 111 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 RNU6-1134P-201ENST00000365156 101 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 RNA5SP259-201ENST00000365541 109 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 RNU6-1152P-201ENST00000384576 107 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 MIR34C-201ENST00000384831 77 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 MIR206-201ENST00000384872 86 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 MIR520C-201ENST00000385005 87 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 MIR450A2-201ENST00000385022 100 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 SNORD41-201ENST00000386967 70 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 HSPE1P24-201ENST00000450782 238 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 SEPT14P17-201ENST00000617978 177 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 MIR1245B-201ENST00000636115 69 ntBASIC1.43□□□□□ -2.18
EBF3Q9H4W6 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 RNU6-53P-201ENST00000365367 106 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 AC109327.2-201ENST00000448339 378 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 snoU13.25-201ENST00000458945 104 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.659-201ENST00000515994 113 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 RNU7-2P-201ENST00000516096 62 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 SNORD67.1-201ENST00000516618 108 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 AL512310.12-203ENST00000640543 90 ntBASIC1.42□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.118-201ENST00000363300 101 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 RNU6-1275P-201ENST00000391087 107 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 RNU7-79P-201ENST00000516082 62 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 MIR3192-201ENST00000584920 77 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 AC105081.1-201ENST00000617727 106 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 MIR4251-201ENST00000635819 61 ntBASIC1.41□□□□□ -2.18
EBF3Q9H4W6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
EBF3Q9H4W6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
EBF3Q9H4W6 SNORD33-201ENST00000362761 85 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 Y_RNA.73-201ENST00000362910 113 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 RNU6-1163P-201ENST00000364516 107 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 SNORD45B-201ENST00000364617 72 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 Y_RNA.355-201ENST00000365462 98 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 RNU6-820P-201ENST00000384273 107 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 RNU6-1321P-201ENST00000390905 107 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 AL451046.2-201ENST00000403074 277 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 MIR1302-7-201ENST00000408841 72 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 AC244023.1-201ENST00000426884 112 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 RNU6-267P-201ENST00000516714 103 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 RNU7-137P-201ENST00000516788 62 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.4□□□□□ -2.19
EBF3Q9H4W6 AC242498.1-201ENST00000604134 111 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 MIR6504-201ENST00000613520 61 ntBASIC1.4□□□□□ -2.19
EBF3Q9H4W6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.4□□□□□ -2.19
EBF3Q9H4W6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
EBF3Q9H4W6 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 Y_RNA.448-201ENST00000384185 108 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 RNU6-1086P-201ENST00000410930 100 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 RNA5SP102-201ENST00000516865 106 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 AC020891.4-201ENST00000605745 93 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 AL096861.1-201ENST00000610899 123 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.39□□□□□ -2.19
EBF3Q9H4W6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
EBF3Q9H4W6 RNY1P13-201ENST00000365030 105 ntBASIC1.38□□□□□ -2.19
EBF3Q9H4W6 RNU6-402P-201ENST00000410678 103 ntBASIC1.38□□□□□ -2.19
EBF3Q9H4W6 RNU6-922P-201ENST00000516753 99 ntBASIC1.38□□□□□ -2.19
EBF3Q9H4W6 MIR4422-201ENST00000581938 83 ntBASIC1.38□□□□□ -2.19
EBF3Q9H4W6 AL357312.1-201ENST00000603879 298 ntBASIC1.38□□□□□ -2.19
EBF3Q9H4W6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.38□□□□□ -2.19
EBF3Q9H4W6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
EBF3Q9H4W6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
EBF3Q9H4W6 RNU6-219P-201ENST00000364728 107 ntBASIC1.37□□□□□ -2.19
EBF3Q9H4W6 RNU6-675P-201ENST00000384236 104 ntBASIC1.37□□□□□ -2.19
EBF3Q9H4W6 U8.15-201ENST00000390947 134 ntBASIC1.37□□□□□ -2.19
EBF3Q9H4W6 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
EBF3Q9H4W6 RNU6-887P-201ENST00000410660 100 ntBASIC1.37□□□□□ -2.19
EBF3Q9H4W6 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
EBF3Q9H4W6 AC004223.1-201ENST00000479840 271 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms