Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC113Q9H0I3 SNORD115-19-201ENST00000363098 82 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 SNORD115-18-201ENST00000363293 82 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 SNORA63.5-201ENST00000363548 123 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 SNORD115-17-201ENST00000364612 82 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 Y_RNA.629-201ENST00000411368 105 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 RNU7-185P-201ENST00000459215 60 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 MIR1270-201ENST00000459320 83 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 RNU6-977P-201ENST00000516411 103 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 AL136317.1-201ENST00000612653 226 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 AC105081.1-201ENST00000617727 106 ntBASIC1.42□□□□□ -2.18
CCDC113Q9H0I3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 RNU6-1290P-201ENST00000362957 109 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 RNU6-880P-201ENST00000384526 107 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 U8.15-201ENST00000390947 134 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 AC015818.7-201ENST00000428754 109 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 AC087499.7-201ENST00000441958 109 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 RNU6-412P-201ENST00000516434 106 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 RNU7-137P-201ENST00000516788 62 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 MIR4679-2-201ENST00000578358 77 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.41□□□□□ -2.18
CCDC113Q9H0I3 RNU6-392P-201ENST00000364926 101 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 SNORD114-24-201ENST00000365029 72 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-447P-201ENST00000410293 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-355P-201ENST00000410427 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-791P-201ENST00000410467 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-705P-201ENST00000410601 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-860P-201ENST00000410860 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-785P-201ENST00000411324 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 SNORD124-201ENST00000459577 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RPL39P34-201ENST00000477141 156 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU7-2P-201ENST00000516096 62 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 U6.90-201ENST00000614007 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 U6.70-201ENST00000620287 104 ntBASIC1.4□□□□□ -2.19
CCDC113Q9H0I3 RNU6-403P-201ENST00000363163 104 ntBASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 RNU1-124P-201ENST00000363861 145 ntBASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 RNU1-36P-201ENST00000365130 165 ntBASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 MIR206-201ENST00000384872 86 ntBASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 SNORD89-201ENST00000390981 114 ntBASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 MIR6129-201ENST00000616087 109 ntBASIC1.39□□□□□ -2.19
CCDC113Q9H0I3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 SNORD115-35-201ENST00000365122 82 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 RNU6-53P-201ENST00000365367 106 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 RNU6-364P-201ENST00000384387 107 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 TRMT112P2-201ENST00000512910 132 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 MIR1255B1-201ENST00000636325 63 ntBASIC1.38□□□□□ -2.19
CCDC113Q9H0I3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.35-201ENST00000362601 101 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 RNU4-67P-201ENST00000364569 141 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 RNU6-865P-201ENST00000364772 107 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 MIR125B2-201ENST00000385128 89 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 RNU6-816P-201ENST00000390914 107 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 MIR1912-201ENST00000410389 80 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 SNORA7.5-201ENST00000410672 110 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 RNU4-83P-201ENST00000410863 133 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 RNU6-521P-201ENST00000516663 105 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 DEFB131E-201ENST00000532329 154 ntBASIC1.37□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 RNU6-409P-201ENST00000384114 104 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 SNORA72.6-201ENST00000384520 129 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 MIR938-201ENST00000401216 83 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 MIR1827-201ENST00000408549 66 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 U7.7-201ENST00000459276 60 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 RNU7-156P-201ENST00000517214 74 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 AC020891.4-201ENST00000605745 93 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 AL162726.3-218ENST00000636401 95 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 AL512310.12-203ENST00000640543 90 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 AL391516.1-201ENST00000554380 2449 ntBASIC1.36□□□□□ -2.19
CCDC113Q9H0I3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 RNU6-363P-201ENST00000362895 105 ntBASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 MIR520F-201ENST00000384824 87 ntBASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 RNU7-48P-201ENST00000458875 63 ntBASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.35□□□□□ -2.19
CCDC113Q9H0I3 MIR4491-201ENST00000581087 68 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms