Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 RNU6-616P-201ENST00000384353 107 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 MIR499A-201ENST00000384903 122 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 RNU6-994P-201ENST00000410507 111 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 SNORA19.1-201ENST00000410656 129 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 SNORD83.1-201ENST00000411362 77 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 AL031737.1-201ENST00000450125 223 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 AC068339.1-201ENST00000526965 141 ntBASIC1.51□□□□□ -2.17
TRIM55Q9BYV6 Y_RNA.163-201ENST00000363702 113 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 SNORA25.9-201ENST00000365087 128 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 RNU6-949P-201ENST00000384040 107 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 RNU6-816P-201ENST00000390914 107 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 RNU6-1268P-201ENST00000391214 107 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 RNU6-1239P-201ENST00000391310 107 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 RNU7-40P-201ENST00000516397 64 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 RNA5SP404-201ENST00000517118 132 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 MIR4679-2-201ENST00000578358 77 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 MIR5009-201ENST00000578736 100 ntBASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
TRIM55Q9BYV6 Y_RNA.49-201ENST00000362714 112 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 SNORD115-19-201ENST00000363098 82 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 SNORD115-18-201ENST00000363293 82 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 SNORD115-17-201ENST00000364612 82 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 RNU6-934P-201ENST00000365154 107 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 SNORA7.5-201ENST00000410672 110 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 SNORD67.1-201ENST00000516618 108 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
TRIM55Q9BYV6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 Y_RNA.118-201ENST00000363300 101 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 Y_RNA.155-201ENST00000363632 101 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 RNU6-756P-201ENST00000383997 107 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 SNORA51.5-201ENST00000384126 131 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 RNA5SP89-201ENST00000410300 108 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 AC141557.1-201ENST00000540982 400 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 FAM71BP1-201ENST00000604431 523 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 AL162726.3-218ENST00000636401 95 ntBASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM55Q9BYV6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 RNU1-124P-201ENST00000363861 145 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 MIR605-201ENST00000385078 83 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 MIR1302-5-201ENST00000408164 150 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 AC015818.7-201ENST00000428754 109 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 AC087499.7-201ENST00000441958 109 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 RNU7-137P-201ENST00000516788 62 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 MIR4771-2-201ENST00000577758 74 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 MIR4771-1-201ENST00000582617 74 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 AC105081.1-201ENST00000617727 106 ntBASIC1.47□□□□□ -2.17
TRIM55Q9BYV6 Y_RNA.309-201ENST00000365046 111 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 Y_RNA.355-201ENST00000365462 98 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 MIR618-201ENST00000385287 98 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 U8.15-201ENST00000390947 134 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 RPS29P28-201ENST00000446439 141 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 SNORD124-201ENST00000459577 104 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 RNU6-168P-201ENST00000516189 101 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 RNU6-109P-201ENST00000516364 107 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 RNU6-184P-201ENST00000516514 107 ntBASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
TRIM55Q9BYV6 AC023934.1-201ENST00000574529 2389 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 RNU4-67P-201ENST00000364569 141 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 Y_RNA.323-201ENST00000365157 109 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 Y_RNA.495-201ENST00000384435 112 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 MIR590-201ENST00000385008 97 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 RPS26P5-201ENST00000418544 335 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 RNU7-185P-201ENST00000459215 60 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM55Q9BYV6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 SNORD114-10-201ENST00000363409 72 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 Y_RNA.328-201ENST00000365208 113 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 Y_RNA.507-201ENST00000384500 99 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 RNU6-1307P-201ENST00000391012 103 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 MIR1257-201ENST00000408490 117 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 AC067940.1-201ENST00000458411 300 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.44□□□□□ -2.18
TRIM55Q9BYV6 RNU6-369P-201ENST00000362515 102 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 SNORA7.1-201ENST00000363750 139 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 MIR206-201ENST00000384872 86 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 MIR200A-201ENST00000384875 90 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 MIR1912-201ENST00000410389 80 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 AC096949.1-201ENST00000412047 152 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 RNU6-521P-201ENST00000516663 105 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
TRIM55Q9BYV6 RNU6-537P-201ENST00000517277 103 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms