Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
TRAIPQ9BWF2 AC087741.2-201ENST00000619415 172 ntBASIC1.66□□□□□ -2.14
TRAIPQ9BWF2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-19-201ENST00000363098 82 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU6-403P-201ENST00000363163 104 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNY1P10-201ENST00000363268 113 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-18-201ENST00000363293 82 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-17-201ENST00000364612 82 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU1-36P-201ENST00000365130 165 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 U8.15-201ENST00000390947 134 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 MIR938-201ENST00000401216 83 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 MIR1827-201ENST00000408549 66 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU6-1064P-201ENST00000410626 104 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU4-83P-201ENST00000410863 133 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU7-2P-201ENST00000516096 62 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 AC025627.3-201ENST00000582078 182 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 MIR4676-201ENST00000583078 72 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.353-201ENST00000365440 108 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 MIR125B2-201ENST00000385128 89 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 RNU6-735P-201ENST00000410612 107 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 DEFB131E-201ENST00000532329 154 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 RNU6-865P-201ENST00000364772 107 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 SNORD116-21-201ENST00000384507 92 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU6-880P-201ENST00000384526 107 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU6-476P-201ENST00000384726 107 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 MIR520F-201ENST00000384824 87 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 MIR548I2-201ENST00000408348 149 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 PDCD5P2-201ENST00000507570 312 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU6-412P-201ENST00000516434 106 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU7-156P-201ENST00000517214 74 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 AC105081.1-201ENST00000617727 106 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 AL391516.1-201ENST00000554380 2449 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 MIR206-201ENST00000384872 86 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 RNU1-119P-201ENST00000391122 165 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 AC015818.7-201ENST00000428754 109 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 AC087499.7-201ENST00000441958 109 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 RPL39P34-201ENST00000477141 156 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 MIR4679-2-201ENST00000578358 77 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 ZNF209P-201ENST00000593450 2304 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.98-201ENST00000363109 102 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 MIR1912-201ENST00000410389 80 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 TRMT112P2-201ENST00000512910 132 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 MIR4421-201ENST00000578133 69 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 MIR4661-201ENST00000582720 75 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 AC020891.4-201ENST00000605745 93 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.155-201ENST00000363632 101 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.273-201ENST00000364703 102 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-35-201ENST00000365122 82 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 RNU6-1144P-201ENST00000384247 104 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.49-201ENST00000362714 112 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 SNORA63.5-201ENST00000363548 123 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 RNU7-48P-201ENST00000458875 63 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 MIR1270-201ENST00000459320 83 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 MIR4804-201ENST00000581683 73 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 MIR337-201ENST00000362281 93 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 RNU4-67P-201ENST00000364569 141 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.291-201ENST00000364886 113 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-409P-201ENST00000384114 104 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 SNORD105-201ENST00000386910 85 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-816P-201ENST00000390914 107 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.629-201ENST00000411368 105 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-521P-201ENST00000516663 105 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 MIR4491-201ENST00000581087 68 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 AL162726.3-218ENST00000636401 95 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 U6.109-201ENST00000636749 87 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNA5SP133-201ENST00000363368 119 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 SNORA7.5-201ENST00000410672 110 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 AL512310.12-203ENST00000640543 90 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 RNU6-363P-201ENST00000362895 105 ntBASIC1.55□□□□□ -2.16
TRAIPQ9BWF2 RNU4-58P-201ENST00000363192 141 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms