Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 RNY1P13-201ENST00000365030 105 ntBASIC0.98□□□□□ -2.25
PAAF1Q9BRP4 RNU6-949P-201ENST00000384040 107 ntBASIC0.98□□□□□ -2.25
PAAF1Q9BRP4 Y_RNA.528-201ENST00000384575 108 ntBASIC0.98□□□□□ -2.25
PAAF1Q9BRP4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
PAAF1Q9BRP4 RNU6-403P-201ENST00000363163 104 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 MIR938-201ENST00000401216 83 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 TMSB4XP3-201ENST00000445144 114 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 RNA5SP255-201ENST00000516370 107 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 RNU6-781P-201ENST00000516377 101 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 AC020891.4-201ENST00000605745 93 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
PAAF1Q9BRP4 RNU1-36P-201ENST00000365130 165 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 MIR125B2-201ENST00000385128 89 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 SNORD105-201ENST00000386910 85 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 RNU1-119P-201ENST00000391122 165 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 RNU7-6P-201ENST00000516845 62 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1234P-201ENST00000516877 103 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 AC025166.1-201ENST00000612411 163 ntBASIC0.96□□□□□ -2.26
PAAF1Q9BRP4 SNORD58C-201ENST00000365223 64 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 U8.15-201ENST00000390947 134 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-447P-201ENST00000410293 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-355P-201ENST00000410427 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-791P-201ENST00000410467 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-705P-201ENST00000410601 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-860P-201ENST00000410860 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU4-83P-201ENST00000410863 133 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-785P-201ENST00000411324 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 COX6CP6-201ENST00000490840 228 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU6-772P-201ENST00000516042 105 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 RNU7-156P-201ENST00000517214 74 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 MIR3163-201ENST00000581592 73 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 MIR4804-201ENST00000581683 73 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 U6.90-201ENST00000614007 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 U6.70-201ENST00000620287 104 ntBASIC0.95□□□□□ -2.26
PAAF1Q9BRP4 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 Y_RNA.198-201ENST00000364013 98 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 Y_RNA.346-201ENST00000365385 112 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 RNU6-80P-201ENST00000384195 107 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 SNORA72.6-201ENST00000384520 129 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 SNORD67.1-201ENST00000516618 108 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 FAM71BP1-201ENST00000604431 523 ntBASIC0.94□□□□□ -2.26
PAAF1Q9BRP4 AL157777.2-201ENST00000258070 137 ntBASIC0.93□□□□□ -2.26
PAAF1Q9BRP4 MIR520H-201ENST00000385126 88 ntBASIC0.93□□□□□ -2.26
PAAF1Q9BRP4 AC133485.1-201ENST00000567176 124 ntBASIC0.93□□□□□ -2.26
PAAF1Q9BRP4 RNU6-369P-201ENST00000362515 102 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 SNORD99-201ENST00000408612 74 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 RNU7-107P-201ENST00000459121 61 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 DEFB131E-201ENST00000532329 154 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 AC105081.1-201ENST00000617727 106 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 MIR6515-201ENST00000619843 57 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 MTND5P18-201ENST00000445624 1801 ntBASIC0.92□□□□□ -2.26
PAAF1Q9BRP4 Y_RNA.71-201ENST00000362892 104 ntBASIC0.91□□□□□ -2.26
PAAF1Q9BRP4 SNORD114-10-201ENST00000363409 72 ntBASIC0.91□□□□□ -2.26
PAAF1Q9BRP4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
PAAF1Q9BRP4 RNU7-56P-201ENST00000458744 62 ntBASIC0.91□□□□□ -2.26
PAAF1Q9BRP4 RNU7-102P-201ENST00000458948 62 ntBASIC0.91□□□□□ -2.26
PAAF1Q9BRP4 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
PAAF1Q9BRP4 Y_RNA.218-201ENST00000364218 104 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 SNORA22-201ENST00000383907 134 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 SNORA22C-201ENST00000384614 134 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 RNU7-137P-201ENST00000516788 62 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 AC011195.1-201ENST00000578177 177 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 MIR4491-201ENST00000581087 68 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
PAAF1Q9BRP4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
PAAF1Q9BRP4 RNU6-959P-201ENST00000384671 107 ntBASIC0.89□□□□□ -2.27
PAAF1Q9BRP4 Y_RNA.630-201ENST00000411370 108 ntBASIC0.89□□□□□ -2.27
PAAF1Q9BRP4 SNORD92-201ENST00000585078 85 ntBASIC0.89□□□□□ -2.27
PAAF1Q9BRP4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 RNA5SP133-201ENST00000363368 119 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 RNY4P6-201ENST00000363667 96 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 RNU6-616P-201ENST00000384353 107 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 Y_RNA.525-201ENST00000384570 113 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 AL359881.1-201ENST00000602916 267 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 U6.109-201ENST00000636749 87 ntBASIC0.88□□□□□ -2.27
PAAF1Q9BRP4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
PAAF1Q9BRP4 SNORD116-14-201ENST00000383894 92 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms