Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
CDCA3Q99618 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
CDCA3Q99618 AL022718.1-201ENST00000412004 84 ntBASIC0.54□□□□□ -2.32
CDCA3Q99618 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
CDCA3Q99618 DNAJC19P2-201ENST00000593340 302 ntBASIC0.54□□□□□ -2.32
CDCA3Q99618 AC004792.1-201ENST00000614523 137 ntBASIC0.54□□□□□ -2.32
CDCA3Q99618 RNY1P11-201ENST00000363759 113 ntBASIC0.53□□□□□ -2.32
CDCA3Q99618 Y_RNA.470-201ENST00000384307 117 ntBASIC0.53□□□□□ -2.32
CDCA3Q99618 MTATP6P21-201ENST00000440681 189 ntBASIC0.53□□□□□ -2.32
CDCA3Q99618 RNU7-113P-201ENST00000459273 62 ntBASIC0.53□□□□□ -2.32
CDCA3Q99618 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.53□□□□□ -2.32
CDCA3Q99618 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CDCA3Q99618 RNY1P13-201ENST00000365030 105 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 SNORD18B-201ENST00000365659 72 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNU6-949P-201ENST00000384040 107 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 MIR1197-201ENST00000408818 88 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 AL512326.2-201ENST00000426359 151 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 AC002350.1-201ENST00000490759 375 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 AC074198.2-201ENST00000508153 258 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNU7-79P-201ENST00000516082 62 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNU6-240P-201ENST00000516098 97 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNA5SP33-201ENST00000516687 98 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 Y_RNA.700-201ENST00000516806 100 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNU6-448P-201ENST00000517052 107 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNU2-60P-201ENST00000517290 128 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 MIR4491-201ENST00000581087 68 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.52□□□□□ -2.33
CDCA3Q99618 RNU6-508P-201ENST00000363231 103 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 Y_RNA.272-201ENST00000364696 102 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 RNA5SP117-201ENST00000365294 118 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 Y_RNA.441-201ENST00000384123 112 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 MIR140-201ENST00000385282 100 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 RNU6-679P-201ENST00000391003 106 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 Y_RNA.584-201ENST00000391090 114 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 RNU6-1086P-201ENST00000410930 100 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 MIR4305-201ENST00000583252 102 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 MIR8066-201ENST00000617280 78 ntBASIC0.51□□□□□ -2.33
CDCA3Q99618 Y_RNA.13-201ENST00000362403 112 ntBASIC0.5□□□□□ -2.33
CDCA3Q99618 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
CDCA3Q99618 Y_RNA.785-201ENST00000384290 109 ntBASIC0.5□□□□□ -2.33
CDCA3Q99618 Y_RNA.617-201ENST00000410920 90 ntBASIC0.5□□□□□ -2.33
CDCA3Q99618 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.5□□□□□ -2.33
CDCA3Q99618 AC011603.4-201ENST00000611325 277 ntBASIC0.5□□□□□ -2.33
CDCA3Q99618 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
CDCA3Q99618 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.49□□□□□ -2.33
CDCA3Q99618 Y_RNA.42-201ENST00000362660 108 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 Y_RNA.120-201ENST00000363304 110 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 RNU6-309P-201ENST00000364573 106 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 RNU4-45P-201ENST00000365469 141 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 SNORA32-201ENST00000384072 121 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 Y_RNA.588-201ENST00000391254 102 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 RNU6-1135P-201ENST00000411083 103 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 AC096949.1-201ENST00000412047 152 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 RNU2-35P-201ENST00000516446 142 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 AC133485.4-201ENST00000561835 220 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 AC138907.4-201ENST00000570107 226 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 MIR6082-201ENST00000613604 109 ntBASIC0.49□□□□□ -2.33
CDCA3Q99618 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CDCA3Q99618 SNORD115-2-201ENST00000362842 82 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 SNORD115-20-201ENST00000365099 82 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 SNORA72.6-201ENST00000384520 129 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 Y_RNA.531-201ENST00000384589 121 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
CDCA3Q99618 Y_RNA.686-201ENST00000516548 134 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 RNU7-35P-201ENST00000517174 62 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 AC112693.2-201ENST00000556538 232 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 AC021443.1-201ENST00000604478 211 ntBASIC0.48□□□□□ -2.33
CDCA3Q99618 Y_RNA.178-201ENST00000363832 102 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 RNU4-11P-201ENST00000365287 132 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 Y_RNA.433-201ENST00000384089 102 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 RNU7-164P-201ENST00000459221 62 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 RNU5E-3P-201ENST00000515913 68 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 Y_RNA.690-201ENST00000516603 95 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 SNORA62.5-201ENST00000516634 120 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 RNU6-182P-201ENST00000516970 105 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 MIR3678-201ENST00000578455 94 ntBASIC0.47□□□□□ -2.33
CDCA3Q99618 RNU6-151P-201ENST00000364158 107 ntBASIC0.46□□□□□ -2.34
CDCA3Q99618 Y_RNA.651-201ENST00000459380 103 ntBASIC0.46□□□□□ -2.34
CDCA3Q99618 SNORA25.16-201ENST00000516741 121 ntBASIC0.46□□□□□ -2.34
CDCA3Q99618 MIR548AE2-201ENST00000583456 67 ntBASIC0.46□□□□□ -2.34
CDCA3Q99618 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
CDCA3Q99618 AL603914.1-201ENST00000401964 204 ntBASIC0.45□□□□□ -2.34
CDCA3Q99618 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
CDCA3Q99618 RNU6-1130P-201ENST00000365434 107 ntBASIC0.44□□□□□ -2.34
CDCA3Q99618 RNU6-449P-201ENST00000383914 107 ntBASIC0.44□□□□□ -2.34
CDCA3Q99618 MIR644A-201ENST00000385262 94 ntBASIC0.44□□□□□ -2.34
CDCA3Q99618 DEFB131E-201ENST00000532329 154 ntBASIC0.44□□□□□ -2.34
CDCA3Q99618 AC090425.1-201ENST00000610007 140 ntBASIC0.44□□□□□ -2.34
CDCA3Q99618 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
CDCA3Q99618 Y_RNA.8-201ENST00000362353 102 ntBASIC0.43□□□□□ -2.34
CDCA3Q99618 Y_RNA.366-201ENST00000365540 102 ntBASIC0.43□□□□□ -2.34
CDCA3Q99618 RNU6-394P-201ENST00000410735 107 ntBASIC0.43□□□□□ -2.34
CDCA3Q99618 RNU7-123P-201ENST00000515911 60 ntBASIC0.43□□□□□ -2.34
CDCA3Q99618 SNORA25.12-201ENST00000516202 82 ntBASIC0.43□□□□□ -2.34
CDCA3Q99618 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
CDCA3Q99618 SNORD67.1-201ENST00000516618 108 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms