Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-90P-201ENST00000606352 106 ntBASIC1.85□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR424-201ENST00000362227 98 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR764-201ENST00000390811 85 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-482P-201ENST00000391068 107 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 RNA5SP100-201ENST00000410903 110 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 RNA5SP59-201ENST00000410922 110 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 SNORA25.15-201ENST00000516487 89 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 MTND5P40-201ENST00000559945 246 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR4712-201ENST00000583750 82 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.84□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR520C-201ENST00000385005 87 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU4-83P-201ENST00000410863 133 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 AC027119.1-201ENST00000440877 241 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU6-237P-201ENST00000515985 71 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 AC019288.1-201ENST00000557918 224 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 CYP3A52P-201ENST00000563326 91 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
CDK5RAP1Q96SZ6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 SNORD114-10-201ENST00000363409 72 ntBASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 AC087499.7-201ENST00000441958 109 ntBASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR3124-201ENST00000582636 67 ntBASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU6-1229P-201ENST00000364295 107 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 AC009474.2-201ENST00000451383 136 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 AC139453.2-201ENST00000487255 133 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 AC141846.1-201ENST00000568348 142 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 AC090897.1-201ENST00000580909 226 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 AL353997.5-201ENST00000618886 171 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR4251-201ENST00000635819 61 ntBASIC1.81□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU4-32P-201ENST00000363404 141 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 Y_RNA.565-201ENST00000384719 101 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR519C-201ENST00000385053 87 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 AC244023.1-201ENST00000426884 112 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU7-43P-201ENST00000516554 64 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 AC242498.1-201ENST00000604134 111 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 Y_RNA.788-201ENST00000622394 112 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR4662A-201ENST00000637499 67 ntBASIC1.8□□□□□ -2.12
CDK5RAP1Q96SZ6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 AL161722.3-201ENST00000605789 2983 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 AL161932.1-201ENST00000437408 146 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 AC005908.1-201ENST00000468701 347 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 AC093729.1-201ENST00000513074 128 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 AC140658.3-201ENST00000567603 271 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR4769-201ENST00000584126 77 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 MIR3192-201ENST00000584920 77 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 AP001362.1-201ENST00000625165 124 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
CDK5RAP1Q96SZ6 Y_RNA.98-201ENST00000363109 102 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 SNORA25.3-201ENST00000363205 127 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 RNU6-478P-201ENST00000363904 110 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 RNA5SP190-201ENST00000365222 118 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 BX276092.1-201ENST00000427368 251 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 AL450471.1-201ENST00000447509 127 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 AC023790.1-201ENST00000482174 347 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 RNA5SP481-201ENST00000516814 122 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 uc_338.6-201ENST00000613544 171 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 AL662814.1-201ENST00000617364 121 ntBASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDK5RAP1Q96SZ6 RNA5SP133-201ENST00000363368 119 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORD38B-201ENST00000384690 67 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 RNA5SP237-201ENST00000410414 113 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-519P-201ENST00000410590 108 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU7-85P-201ENST00000458851 63 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 AC138749.4-201ENST00000563970 127 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORD38B-202ENST00000625943 69 ntBASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
CDK5RAP1Q96SZ6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR194-1-201ENST00000384892 85 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR1302-7-201ENST00000408841 72 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 snoU13.25-201ENST00000458945 104 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms