Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.56□□□□□ -2.32
NR1H4Q96RI1 MIR548J-201ENST00000408833 112 ntBASIC0.56□□□□□ -2.32
NR1H4Q96RI1 AL512326.2-201ENST00000426359 151 ntBASIC0.56□□□□□ -2.32
NR1H4Q96RI1 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
NR1H4Q96RI1 RNU2-35P-201ENST00000516446 142 ntBASIC0.56□□□□□ -2.32
NR1H4Q96RI1 MIR6788-201ENST00000618842 66 ntBASIC0.56□□□□□ -2.32
NR1H4Q96RI1 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
NR1H4Q96RI1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.251-201ENST00000364551 99 ntBASIC0.55□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.580-201ENST00000391004 95 ntBASIC0.55□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.55□□□□□ -2.32
NR1H4Q96RI1 MIR548AE2-201ENST00000583456 67 ntBASIC0.55□□□□□ -2.32
NR1H4Q96RI1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NR1H4Q96RI1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.54□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 RNU6-309P-201ENST00000364573 106 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 RNU6-42P-201ENST00000384165 107 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 RN7SKP12-201ENST00000516275 143 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.686-201ENST00000516548 134 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 CYP3A137P-201ENST00000562436 69 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
NR1H4Q96RI1 RNU4-58P-201ENST00000363192 141 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 SNORD77B-201ENST00000391112 67 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 SNORD71-201ENST00000411292 86 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.651-201ENST00000459380 103 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 RNU7-123P-201ENST00000515911 60 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 AC138907.6-201ENST00000568401 126 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 FTX_2.1-201ENST00000618816 94 ntBASIC0.53□□□□□ -2.32
NR1H4Q96RI1 Y_RNA.298-201ENST00000364960 107 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 RNU4-69P-201ENST00000410677 143 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.692-201ENST00000516627 105 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 MIR3678-201ENST00000578455 94 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 AL137067.1-201ENST00000615933 120 ntBASIC0.52□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.8-201ENST00000362353 102 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNA5SP133-201ENST00000363368 119 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 SNORD114-10-201ENST00000363409 72 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNY1P11-201ENST00000363759 113 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNU6-1130P-201ENST00000365434 107 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNU6-394P-201ENST00000410735 107 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 AC096949.1-201ENST00000412047 152 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 SNORA25.12-201ENST00000516202 82 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 SNORA25.16-201ENST00000516741 121 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNU6-135P-201ENST00000516769 101 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNU6-794P-201ENST00000517261 64 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 AC098479.1-201ENST00000609225 154 ntBASIC0.51□□□□□ -2.33
NR1H4Q96RI1 RNU6-915P-201ENST00000364943 103 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
NR1H4Q96RI1 snoU13.18-201ENST00000459483 104 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 SNORD67.1-201ENST00000516618 108 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 RNU7-137P-201ENST00000516788 62 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 MIR548X2-201ENST00000579776 100 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 U6.109-201ENST00000636749 87 ntBASIC0.5□□□□□ -2.33
NR1H4Q96RI1 MIR101-2-201ENST00000362195 79 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.150-201ENST00000363562 102 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 RNU6-535P-201ENST00000384722 107 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 RNU6-460P-201ENST00000391158 108 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 RNU7-197P-201ENST00000458836 62 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 MIR5000-201ENST00000577717 103 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 MIR3144-201ENST00000579460 79 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
NR1H4Q96RI1 RNU6-508P-201ENST00000363231 103 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 RNU6-804P-201ENST00000384286 107 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 RNU6-886P-201ENST00000384319 105 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 RNY4P20-201ENST00000516678 93 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 AP001328.1-201ENST00000528550 176 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.48□□□□□ -2.33
NR1H4Q96RI1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.47□□□□□ -2.33
NR1H4Q96RI1 RNU6-531P-201ENST00000516694 104 ntBASIC0.47□□□□□ -2.33
NR1H4Q96RI1 MTND5P34-201ENST00000568888 325 ntBASIC0.47□□□□□ -2.33
NR1H4Q96RI1 Y_RNA.400-201ENST00000383963 111 ntBASIC0.46□□□□□ -2.34
NR1H4Q96RI1 RNU6-291P-201ENST00000384720 107 ntBASIC0.46□□□□□ -2.34
NR1H4Q96RI1 MIR644A-201ENST00000385262 94 ntBASIC0.46□□□□□ -2.34
NR1H4Q96RI1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.46□□□□□ -2.34
NR1H4Q96RI1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.46□□□□□ -2.34
NR1H4Q96RI1 MIR6515-201ENST00000619843 57 ntBASIC0.46□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 RNA5SP517-201ENST00000364724 117 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.398-201ENST00000383952 99 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 MIR759-201ENST00000390224 91 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 SNORA31.14-201ENST00000516728 116 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 MIR3121-201ENST00000579680 77 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms