Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.71□□□□□ -2.3
ZIM3Q96PE6 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 RNU6-616P-201ENST00000384353 107 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 MIR548D2-201ENST00000384955 97 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 RNU6-1154P-201ENST00000391001 104 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 RNU7-79P-201ENST00000516082 62 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 ACA64.5-201ENST00000516207 127 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 MIR6767-201ENST00000637302 66 ntBASIC0.7□□□□□ -2.3
ZIM3Q96PE6 RNU6-1290P-201ENST00000362957 109 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.291-201ENST00000364886 113 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.362-201ENST00000365518 110 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 RNU6-1144P-201ENST00000384247 104 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 MIR206-201ENST00000384872 86 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 RNU6-893P-201ENST00000458841 100 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.69□□□□□ -2.3
ZIM3Q96PE6 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 AL359821.1-201ENST00000605519 182 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 MIR6715A-201ENST00000615929 79 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 MIR8066-201ENST00000617280 78 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 U6.95-201ENST00000636931 70 ntBASIC0.69□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.354-201ENST00000365448 111 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 MT-TF-201ENST00000387314 71 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 MIR1827-201ENST00000408549 66 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.649-201ENST00000459077 103 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 RNU6-313P-201ENST00000516317 112 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 RNU6-589P-201ENST00000516485 107 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 MIR4679-2-201ENST00000578358 77 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 MIR6129-201ENST00000616087 109 ntBASIC0.68□□□□□ -2.3
ZIM3Q96PE6 AL589743.1-201ENST00000551932 2712 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.35-201ENST00000362601 101 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 SNORD114-27-201ENST00000363766 70 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.346-201ENST00000365385 112 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RNU6-476P-201ENST00000384726 107 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 MIR548A1-201ENST00000385041 97 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RNU6-1321P-201ENST00000390905 107 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 MIR18B-201ENST00000454574 71 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RNU6-62P-201ENST00000516526 102 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RNU7-6P-201ENST00000516845 62 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 RNU6-1006P-201ENST00000516998 103 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 AC138749.4-201ENST00000563970 127 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 MIR3163-201ENST00000581592 73 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.67□□□□□ -2.3
ZIM3Q96PE6 SNORA4-201ENST00000584302 138 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 AC008608.1-201ENST00000603910 127 ntBASIC0.67□□□□□ -2.3
ZIM3Q96PE6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.67□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.42-201ENST00000362660 108 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.213-201ENST00000364178 111 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.281-201ENST00000364774 94 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.299-201ENST00000364973 94 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 RNU6-934P-201ENST00000365154 107 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 RNU6-215P-201ENST00000365169 102 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 RNU6-679P-201ENST00000391003 106 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 RNA5SP458-201ENST00000516188 119 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 AC007012.1-201ENST00000567192 175 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 MIR4771-2-201ENST00000577758 74 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 MIR3613-201ENST00000579844 87 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 MIR4491-201ENST00000581087 68 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 MIR4771-1-201ENST00000582617 74 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 MIR4676-201ENST00000583078 72 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 AL670379.3-201ENST00000605040 251 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 AC105081.1-201ENST00000617727 106 ntBASIC0.66□□□□□ -2.3
ZIM3Q96PE6 RNU6-834P-201ENST00000362367 110 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 SNORD114-10-201ENST00000363409 72 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.247-201ENST00000364500 92 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.273-201ENST00000364703 102 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 SNORD115-35-201ENST00000365122 82 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 RNU7-56P-201ENST00000458744 62 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 MIR4804-201ENST00000581683 73 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 MIR4769-201ENST00000584126 77 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 MIR376B-201ENST00000614515 100 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 RMST_2.1-201ENST00000617263 136 ntBASIC0.65□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.85-201ENST00000363014 111 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
ZIM3Q96PE6 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 MIR125B2-201ENST00000385128 89 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 MIR548A3-201ENST00000385297 97 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 RNY4P18-201ENST00000391107 89 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 RNU6-1064P-201ENST00000410626 104 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.629-201ENST00000411368 105 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 RNU7-2P-201ENST00000516096 62 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 SNORA25.16-201ENST00000516741 121 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 SNORD92-201ENST00000585078 85 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 AL162726.3-218ENST00000636401 95 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
ZIM3Q96PE6 RNU6-363P-201ENST00000362895 105 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.323-201ENST00000365157 109 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 Y_RNA.448-201ENST00000384185 108 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 SNORD116-21-201ENST00000384507 92 ntBASIC0.63□□□□□ -2.31
ZIM3Q96PE6 MIR34C-201ENST00000384831 77 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms