Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU7-113P-201ENST00000459273 62 ntBASIC-0.41□□□□□ -2.48
RPRD1AQ96P16 MIR378D2-201ENST00000580636 98 ntBASIC-0.41□□□□□ -2.48
RPRD1AQ96P16 MIR4802-201ENST00000581881 80 ntBASIC-0.41□□□□□ -2.48
RPRD1AQ96P16 MIR3925-201ENST00000584674 77 ntBASIC-0.41□□□□□ -2.48
RPRD1AQ96P16 AC134503.1-201ENST00000633048 54 ntBASIC-0.41□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 RNU6-103P-201ENST00000363686 107 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 AL121914.1-201ENST00000450188 156 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 RNU7-137P-201ENST00000516788 62 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 MIR4677-201ENST00000584153 80 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 U7.6-201ENST00000610841 64 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 uc_338.28-201ENST00000612082 187 ntBASIC-0.42□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 RNA5SP403-201ENST00000363598 108 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 RNU6-923P-201ENST00000364753 107 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 RNY1P2-201ENST00000364820 117 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 SNORD67.1-201ENST00000516618 108 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 RNA5SP33-201ENST00000516687 98 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 AL359881.1-201ENST00000602916 267 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 AC098479.1-201ENST00000609225 154 ntBASIC-0.43□□□□□ -2.48
RPRD1AQ96P16 SNORD41.1-201ENST00000391000 69 ntBASIC-0.44□□□□□ -2.48
RPRD1AQ96P16 MIR548P-201ENST00000408336 84 ntBASIC-0.44□□□□□ -2.48
RPRD1AQ96P16 RNU6-180P-201ENST00000516697 61 ntBASIC-0.44□□□□□ -2.48
RPRD1AQ96P16 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.44□□□□□ -2.48
RPRD1AQ96P16 SNORD115-2-201ENST00000362842 82 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 SNORD115-20-201ENST00000365099 82 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 MIR1912-201ENST00000410389 80 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 SNORD4A-201ENST00000459174 72 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 MIR5589-201ENST00000579442 60 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 MIR4744-201ENST00000581563 82 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 AC006504.6-201ENST00000590142 199 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 AC073869.9-201ENST00000641610 120 ntBASIC-0.45□□□□□ -2.48
RPRD1AQ96P16 AL022718.1-201ENST00000412004 84 ntBASIC-0.46□□□□□ -2.48
RPRD1AQ96P16 RNU2-60P-201ENST00000517290 128 ntBASIC-0.46□□□□□ -2.48
RPRD1AQ96P16 MIR548H5-201ENST00000580314 60 ntBASIC-0.46□□□□□ -2.48
RPRD1AQ96P16 MIR4636-201ENST00000582271 80 ntBASIC-0.46□□□□□ -2.48
RPRD1AQ96P16 SNORA18.1-201ENST00000363418 128 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 SNORD114-12-201ENST00000365400 75 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 RNU6-320P-201ENST00000516511 106 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 MIR4645-201ENST00000583158 77 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 MIR548AE2-201ENST00000583456 67 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 MIR3171-201ENST00000584270 74 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 AL670379.3-201ENST00000605040 251 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 AC105081.1-201ENST00000617727 106 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 MIR6514-201ENST00000622549 70 ntBASIC-0.47□□□□□ -2.48
RPRD1AQ96P16 MIR335-201ENST00000362173 94 ntBASIC-0.48□□□□□ -2.49
RPRD1AQ96P16 SNORD114-10-201ENST00000363409 72 ntBASIC-0.48□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.48□□□□□ -2.49
RPRD1AQ96P16 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.48□□□□□ -2.49
RPRD1AQ96P16 RNU6-46P-201ENST00000383860 107 ntBASIC-0.49□□□□□ -2.49
RPRD1AQ96P16 RNU6-429P-201ENST00000384582 108 ntBASIC-0.49□□□□□ -2.49
RPRD1AQ96P16 RNU6-578P-201ENST00000390980 103 ntBASIC-0.49□□□□□ -2.49
RPRD1AQ96P16 SNORA75.1-201ENST00000391130 148 ntBASIC-0.49□□□□□ -2.49
RPRD1AQ96P16 AC011921.3-201ENST00000605540 361 ntBASIC-0.49□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 RNU6-985P-201ENST00000410182 104 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 HMGN2P22-201ENST00000427588 175 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 AC020661.2-201ENST00000560114 134 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 AL356055.1-201ENST00000602528 446 ntBASIC-0.5□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 RNU6-35P-201ENST00000384530 107 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 SNORD110-201ENST00000408189 75 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 AC006210.1-201ENST00000424882 111 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 MIR4643-201ENST00000577473 78 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 AP001180.6-201ENST00000584918 159 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 RNU7-10P-201ENST00000607194 63 ntBASIC-0.51□□□□□ -2.49
RPRD1AQ96P16 SNORD114-28-201ENST00000363610 72 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 RNA5SP275-201ENST00000363936 118 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 RNU6-449P-201ENST00000383914 107 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 RNU6-643P-201ENST00000384018 107 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 RNU6-713P-201ENST00000384761 107 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 MIR106A-201ENST00000384870 81 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 MIR599-201ENST00000385069 95 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 MIR1270-201ENST00000459320 83 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 TRAJ51-201ENST00000504127 63 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 CR383656.4-201ENST00000546909 122 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 NAMPTP3-201ENST00000569273 224 ntBASIC-0.52□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 MIR876-201ENST00000401147 81 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 AC096531.1-201ENST00000419107 107 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 RNA5SP484-201ENST00000458857 111 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 RNY3P16-201ENST00000516338 101 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms