Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SNORA8.2-201ENST00000384372 139 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 SNORA20-201ENST00000384662 132 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 Y_RNA.567-201ENST00000384736 106 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNU6-1086P-201ENST00000410930 100 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNU7-197P-201ENST00000458836 62 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNU7-123P-201ENST00000515911 60 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNA5SP33-201ENST00000516687 98 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNU7-137P-201ENST00000516788 62 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNU7-70P-201ENST00000516941 66 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 AC138749.4-201ENST00000563970 127 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 MIR3152-201ENST00000579801 74 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
LINC00477Q96M19 RNA5SP133-201ENST00000363368 119 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 Y_RNA.240-201ENST00000364469 95 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNU6-312P-201ENST00000364629 107 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNU6-200P-201ENST00000364743 107 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNY1P2-201ENST00000364820 117 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNU6-690P-201ENST00000365242 106 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 Y_RNA.354-201ENST00000365448 111 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNU6-187P-201ENST00000384139 106 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 MIR518A1-201ENST00000385068 85 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNU6-460P-201ENST00000391158 108 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 SUMO1P3-201ENST00000439961 304 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNU7-113P-201ENST00000459273 62 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 snoU13.18-201ENST00000459483 104 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 AC107027.2-201ENST00000512197 115 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNA5SP272-201ENST00000516095 111 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 SNORA81.3-201ENST00000517283 198 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.25□□□□□ -2.37
LINC00477Q96M19 MIR4305-201ENST00000583252 102 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 MIR6515-201ENST00000619843 57 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 U6.109-201ENST00000636749 87 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 MIR6844-201ENST00000637122 62 ntBASIC0.25□□□□□ -2.37
LINC00477Q96M19 SNORD115-2-201ENST00000362842 82 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 Y_RNA.118-201ENST00000363300 101 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 Y_RNA.294-201ENST00000364916 102 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 SNORD115-20-201ENST00000365099 82 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 Y_RNA.489-201ENST00000384410 101 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 Y_RNA.531-201ENST00000384589 121 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 RNU6-239P-201ENST00000390990 99 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 SNORA75.5-201ENST00000391291 81 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 PCNPP3-201ENST00000393579 471 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 AL603914.1-201ENST00000401964 204 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 RNA5SP261-201ENST00000410536 106 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 MIR7107-201ENST00000611489 80 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
LINC00477Q96M19 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.24□□□□□ -2.37
LINC00477Q96M19 RNU4-11P-201ENST00000365287 132 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 Y_RNA.337-201ENST00000365312 102 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 Y_RNA.441-201ENST00000384123 112 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 Y_RNA.536-201ENST00000384621 113 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC00477Q96M19 AC069271.1-201ENST00000445577 156 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 RNU7-120P-201ENST00000459334 63 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 SNORA25.12-201ENST00000516202 82 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 RNU6-1232P-201ENST00000516299 86 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 MIR4752-201ENST00000579672 72 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.23□□□□□ -2.37
LINC00477Q96M19 AC021443.1-201ENST00000604478 211 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 AC072026.1-201ENST00000605023 201 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 RNU1-29P-201ENST00000606574 126 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 AC004792.1-201ENST00000614523 137 ntBASIC0.23□□□□□ -2.37
LINC00477Q96M19 Y_RNA.272-201ENST00000364696 102 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 RNA5SP117-201ENST00000365294 118 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 Y_RNA.357-201ENST00000365487 109 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 RNU6-815P-201ENST00000384080 113 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 RNU6-804P-201ENST00000384286 107 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 Y_RNA.508-201ENST00000384502 114 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 RNU6-535P-201ENST00000384722 107 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 RNU6-1321P-201ENST00000390905 107 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 snosnR66.1-201ENST00000391095 99 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 SNORA40.8-201ENST00000411034 126 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 RNU7-164P-201ENST00000459221 62 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 MTND5P41-201ENST00000517498 206 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 AC243829.6-201ENST00000612652 106 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 MIR6513-201ENST00000621188 64 ntBASIC0.22□□□□□ -2.37
LINC00477Q96M19 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC00477Q96M19 Y_RNA.150-201ENST00000363562 102 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 Y_RNA.298-201ENST00000364960 107 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 MT-TG-201ENST00000387429 68 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 RNU6-735P-201ENST00000410612 107 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 AL022718.1-201ENST00000412004 84 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 RNU5E-3P-201ENST00000515913 68 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 Y_RNA.690-201ENST00000516603 95 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 RNY4P20-201ENST00000516678 93 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 Y_RNA.697-201ENST00000516776 113 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 RNU6-765P-201ENST00000516916 99 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 RNA5SP47-201ENST00000517230 109 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 AP003327.1-201ENST00000529684 127 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 DNAJC19P2-201ENST00000593340 302 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 AC022709.1-201ENST00000615967 87 ntBASIC0.21□□□□□ -2.38
LINC00477Q96M19 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LINC00477Q96M19 Y_RNA.119-201ENST00000363301 96 ntBASIC0.2□□□□□ -2.38
LINC00477Q96M19 RNU6-151P-201ENST00000364158 107 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms