Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SNX27Q96L92 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SNX27Q96L92 Y_RNA.525-201ENST00000384570 113 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 RNU6-1237P-201ENST00000384777 107 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 Y_RNA.586-201ENST00000391146 98 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 RNA5SP193-201ENST00000410353 107 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 RNA5SP144-201ENST00000410846 116 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 FABP5P4-201ENST00000437203 171 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 snoU13.21-201ENST00000459368 105 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 AP001328.1-201ENST00000528550 176 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 AC133485.4-201ENST00000561835 220 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 AC138907.4-201ENST00000570107 226 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 Y_RNA.757-201ENST00000578934 114 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 MIR4802-201ENST00000581881 80 ntBASIC1.12□□□□□ -2.23
SNX27Q96L92 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
SNX27Q96L92 Y_RNA.35-201ENST00000362601 101 ntBASIC1.11□□□□□ -2.23
SNX27Q96L92 RNU6-235P-201ENST00000362644 107 ntBASIC1.11□□□□□ -2.23
SNX27Q96L92 AL022718.1-201ENST00000412004 84 ntBASIC1.11□□□□□ -2.23
SNX27Q96L92 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
SNX27Q96L92 Y_RNA.692-201ENST00000516627 105 ntBASIC1.11□□□□□ -2.23
SNX27Q96L92 AL365222.1-201ENST00000614661 98 ntBASIC1.11□□□□□ -2.23
SNX27Q96L92 Y_RNA.171-201ENST00000363760 102 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 Y_RNA.261-201ENST00000364631 102 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 RNU6-934P-201ENST00000365154 107 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 SNORA40-201ENST00000388090 126 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 RNU6-1165P-201ENST00000410119 107 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 RNA5SP237-201ENST00000410414 113 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 SNORD83.1-201ENST00000411362 77 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 RNU6-1258P-201ENST00000516911 111 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 MIR4711-201ENST00000578274 70 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 MIR4305-201ENST00000583252 102 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 uc_338.6-201ENST00000613544 171 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 AP001340.1-201ENST00000624405 217 ntBASIC1.1□□□□□ -2.23
SNX27Q96L92 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 RNU7-113P-201ENST00000459273 62 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 AC113410.1-201ENST00000505029 247 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 MIR3121-201ENST00000579680 77 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 AC021443.1-201ENST00000604478 211 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.09□□□□□ -2.23
SNX27Q96L92 RNA5SP368-201ENST00000364298 116 ntBASIC1.08□□□□□ -2.24
SNX27Q96L92 RNU6-959P-201ENST00000384671 107 ntBASIC1.08□□□□□ -2.24
SNX27Q96L92 MIR563-201ENST00000385080 79 ntBASIC1.08□□□□□ -2.24
SNX27Q96L92 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
SNX27Q96L92 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
SNX27Q96L92 MIR18B-201ENST00000454574 71 ntBASIC1.08□□□□□ -2.24
SNX27Q96L92 RNU7-107P-201ENST00000459121 61 ntBASIC1.08□□□□□ -2.24
SNX27Q96L92 IGLVI-20-201ENST00000519296 130 ntBASIC1.08□□□□□ -2.24
SNX27Q96L92 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
SNX27Q96L92 MIR1-1-201ENST00000362147 71 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 Y_RNA.218-201ENST00000364218 104 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 Y_RNA.366-201ENST00000365540 102 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 MIR100-201ENST00000385259 80 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 AL512326.2-201ENST00000426359 151 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 RNU7-164P-201ENST00000459221 62 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 PDCD5P2-201ENST00000507570 312 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 RNU6-758P-201ENST00000516292 89 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 RNU2-35P-201ENST00000516446 142 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 MIR4771-2-201ENST00000577758 74 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 MIR4771-1-201ENST00000582617 74 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 AC108081.1-201ENST00000604358 221 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SNX27Q96L92 Y_RNA.71-201ENST00000362892 104 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 SNORA18-201ENST00000384416 132 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 RNU6-1154P-201ENST00000391001 104 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 RPS26P5-201ENST00000418544 335 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 AC015818.7-201ENST00000428754 109 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 AC087499.7-201ENST00000441958 109 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 SNORD57-201ENST00000448188 72 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 RNU6-1333P-201ENST00000516162 93 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 RNU6-1061P-201ENST00000516530 99 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 AL137067.1-201ENST00000615933 120 ntBASIC1.06□□□□□ -2.24
SNX27Q96L92 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SNX27Q96L92 MIR30D-201ENST00000362283 70 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 SNORD50.2-201ENST00000365465 70 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 RNU6-81P-201ENST00000365608 104 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 Y_RNA.470-201ENST00000384307 117 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 RNU6-22P-201ENST00000384355 107 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 RNU6-1117P-201ENST00000384525 104 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 MIR1827-201ENST00000408549 66 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 snoU13.11-201ENST00000459219 104 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 RNA5SP33-201ENST00000516687 98 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 AC004812.1-201ENST00000540773 146 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 MTRNR2L2-201ENST00000604882 87 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 AL136317.1-201ENST00000612653 226 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 AL662814.1-201ENST00000617364 121 ntBASIC1.05□□□□□ -2.24
SNX27Q96L92 Y_RNA.114-201ENST00000363265 113 ntBASIC1.04□□□□□ -2.24
SNX27Q96L92 Y_RNA.291-201ENST00000364886 113 ntBASIC1.04□□□□□ -2.24
SNX27Q96L92 Y_RNA.531-201ENST00000384589 121 ntBASIC1.04□□□□□ -2.24
SNX27Q96L92 MT-TF-201ENST00000387314 71 ntBASIC1.04□□□□□ -2.24
SNX27Q96L92 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
SNX27Q96L92 RNA5SP255-201ENST00000516370 107 ntBASIC1.04□□□□□ -2.24
SNX27Q96L92 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 315.8 ms