Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SNORA25.3-201ENST00000363205 127 ntBASIC2.27□□□□□ -2.05
IFT43Q96FT9 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
IFT43Q96FT9 AC093729.1-201ENST00000513074 128 ntBASIC2.27□□□□□ -2.05
IFT43Q96FT9 MIR4299-201ENST00000577899 72 ntBASIC2.27□□□□□ -2.05
IFT43Q96FT9 AC020891.4-201ENST00000605745 93 ntBASIC2.27□□□□□ -2.05
IFT43Q96FT9 MIR7843-201ENST00000622274 79 ntBASIC2.27□□□□□ -2.05
IFT43Q96FT9 MIR4662A-201ENST00000637499 67 ntBASIC2.27□□□□□ -2.05
IFT43Q96FT9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
IFT43Q96FT9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
IFT43Q96FT9 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 SNORD115-27-201ENST00000364430 82 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 Y_RNA.316-201ENST00000365118 111 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 MIR563-201ENST00000385080 79 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 MIR221-201ENST00000385135 110 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 RNU6-519P-201ENST00000410590 108 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 AL133373.1-201ENST00000497098 94 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 MIR4264-201ENST00000583520 66 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 MIR6873-201ENST00000622788 63 ntBASIC2.26□□□□□ -2.05
IFT43Q96FT9 SNORD115-37-201ENST00000363768 82 ntBASIC2.25□□□□□ -2.05
IFT43Q96FT9 RNU6-524P-201ENST00000384270 107 ntBASIC2.25□□□□□ -2.05
IFT43Q96FT9 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
IFT43Q96FT9 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
IFT43Q96FT9 MIR2115-201ENST00000516657 100 ntBASIC2.25□□□□□ -2.05
IFT43Q96FT9 AC090897.1-201ENST00000580909 226 ntBASIC2.25□□□□□ -2.05
IFT43Q96FT9 SNORA4-201ENST00000584302 138 ntBASIC2.25□□□□□ -2.05
IFT43Q96FT9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
IFT43Q96FT9 RNA5SP133-201ENST00000363368 119 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 RNU4-52P-201ENST00000384209 138 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 MT-TN-201ENST00000387400 73 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 snoU13.25-201ENST00000458945 104 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 RN7SL274P-201ENST00000492268 272 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 RNU6-237P-201ENST00000515985 71 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 AC138749.4-201ENST00000563970 127 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 MIR4500-201ENST00000579472 76 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 MIR8063-201ENST00000621930 81 ntBASIC2.24□□□□□ -2.05
IFT43Q96FT9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
IFT43Q96FT9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
IFT43Q96FT9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
IFT43Q96FT9 RNA5SP432-201ENST00000362480 116 ntBASIC2.23□□□□□ -2.05
IFT43Q96FT9 SNORD114-1-201ENST00000362705 72 ntBASIC2.23□□□□□ -2.05
IFT43Q96FT9 MIR6740-201ENST00000618268 113 ntBASIC2.23□□□□□ -2.05
IFT43Q96FT9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.23□□□□□ -2.05
IFT43Q96FT9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
IFT43Q96FT9 RNU6-571P-201ENST00000384128 107 ntBASIC2.22□□□□□ -2.05
IFT43Q96FT9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
IFT43Q96FT9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.22□□□□□ -2.05
IFT43Q96FT9 SNRPGP12-201ENST00000449481 213 ntBASIC2.22□□□□□ -2.05
IFT43Q96FT9 snoU13.9-201ENST00000458927 103 ntBASIC2.22□□□□□ -2.05
IFT43Q96FT9 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
IFT43Q96FT9 AP003716.2-201ENST00000528260 108 ntBASIC2.22□□□□□ -2.05
IFT43Q96FT9 AC103810.8-201ENST00000607347 118 ntBASIC2.22□□□□□ -2.05
IFT43Q96FT9 MIR219B-201ENST00000637023 88 ntBASIC2.22□□□□□ -2.05
IFT43Q96FT9 Y_RNA.57-201ENST00000362806 113 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 MIR1236-201ENST00000408340 102 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 RNU11-2P-201ENST00000516898 142 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 AL512598.1-201ENST00000610158 273 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.21□□□□□ -2.06
IFT43Q96FT9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 U6.109-201ENST00000636749 87 ntBASIC2.21□□□□□ -2.06
IFT43Q96FT9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
IFT43Q96FT9 ZNF355P-201ENST00000427301 3216 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 MIR30D-201ENST00000362283 70 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 Y_RNA.119-201ENST00000363301 96 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 RNU6-205P-201ENST00000390858 107 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 RNU6-1165P-201ENST00000410119 107 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 AC087499.7-201ENST00000441958 109 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 snoU13.23-201ENST00000458863 104 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 RNU6-850P-201ENST00000516934 103 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 MIR4524B-201ENST00000581569 115 ntBASIC2.2□□□□□ -2.06
IFT43Q96FT9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
IFT43Q96FT9 MIR302D-201ENST00000362275 68 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 Y_RNA.94-201ENST00000363068 106 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 RNU6-776P-201ENST00000364403 104 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 RNU6-1022P-201ENST00000365049 104 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 MT-TF-201ENST00000387314 71 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
IFT43Q96FT9 RNU4-83P-201ENST00000410863 133 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 RNU7-62P-201ENST00000458856 62 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 SNORD4B-201ENST00000459083 72 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 SNORA44.1-201ENST00000517031 108 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 AC140658.3-201ENST00000567603 271 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 MIR6516-201ENST00000630554 81 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
IFT43Q96FT9 AC008163.1-202ENST00000636004 2889 ntBASIC2.19□□□□□ -2.06
IFT43Q96FT9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
IFT43Q96FT9 RNA5SP264-201ENST00000363115 107 ntBASIC2.18□□□□□ -2.06
IFT43Q96FT9 SNORD1A-201ENST00000364968 72 ntBASIC2.18□□□□□ -2.06
IFT43Q96FT9 MIR30A-201ENST00000385092 71 ntBASIC2.18□□□□□ -2.06
IFT43Q96FT9 MIR1185-1-201ENST00000408598 86 ntBASIC2.18□□□□□ -2.06
IFT43Q96FT9 HMGN2P23-201ENST00000456759 269 ntBASIC2.18□□□□□ -2.06
IFT43Q96FT9 AC005908.1-201ENST00000468701 347 ntBASIC2.18□□□□□ -2.06
IFT43Q96FT9 RPL30P7-201ENST00000479312 323 ntBASIC2.18□□□□□ -2.06
IFT43Q96FT9 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms