Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 AC074198.2-201ENST00000508153 258 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 RNY3P15-201ENST00000516297 97 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 RNA5SP67-201ENST00000516422 131 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 RNU7-70P-201ENST00000516941 66 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 AC138749.4-201ENST00000563970 127 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.44□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 RNU6-978P-201ENST00000364371 103 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 MIR3681-201ENST00000580089 72 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 MIR378D2-201ENST00000580636 98 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 U6.109-201ENST00000636749 87 ntBASIC-0.45□□□□□ -2.48
ECHDC3Q96DC8 SNORD115-2-201ENST00000362842 82 ntBASIC-0.46□□□□□ -2.48
ECHDC3Q96DC8 SNORD115-20-201ENST00000365099 82 ntBASIC-0.46□□□□□ -2.48
ECHDC3Q96DC8 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.46□□□□□ -2.48
ECHDC3Q96DC8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.46□□□□□ -2.48
ECHDC3Q96DC8 AC073869.9-201ENST00000641610 120 ntBASIC-0.46□□□□□ -2.48
ECHDC3Q96DC8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 MIR101-2-201ENST00000362195 79 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 RNU4-16P-201ENST00000364737 141 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 RNU6-728P-201ENST00000365375 104 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 RNU6-735P-201ENST00000410612 107 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 RNA5SP144-201ENST00000410846 116 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 RNU6-651P-201ENST00000411040 105 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 snoU13.11-201ENST00000459219 104 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 AC082651.2-201ENST00000496833 166 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 RNU6-570P-201ENST00000517051 105 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 AC011921.3-201ENST00000605540 361 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 FTX_2.1-201ENST00000618816 94 ntBASIC-0.47□□□□□ -2.48
ECHDC3Q96DC8 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 MIR624-201ENST00000385217 97 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 MIR548L-201ENST00000408303 86 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 SNORA79-201ENST00000408376 140 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 MTND5P22-201ENST00000458380 195 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 RNU6-138P-201ENST00000515952 107 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 RNU7-137P-201ENST00000516788 62 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 CR383656.4-201ENST00000546909 122 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 AC113195.1-201ENST00000579952 141 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 MIR4282-201ENST00000583613 67 ntBASIC-0.48□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 RNU6-474P-201ENST00000384243 107 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 MIR106A-201ENST00000384870 81 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 SNORA75.1-201ENST00000391130 148 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 MIR876-201ENST00000401147 81 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 RNU7-104P-201ENST00000459398 79 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 RNU2-60P-201ENST00000517290 128 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 AC098479.1-201ENST00000609225 154 ntBASIC-0.49□□□□□ -2.49
ECHDC3Q96DC8 RNY1P2-201ENST00000364820 117 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 MT-TD-201ENST00000387419 68 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 AC109327.2-201ENST00000448339 378 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 SNORD116-25-201ENST00000516517 92 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 MIR548H5-201ENST00000580314 60 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 AL365265.1-201ENST00000621045 234 ntBASIC-0.5□□□□□ -2.49
ECHDC3Q96DC8 MIR148A-201ENST00000362215 68 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 RNY1P6-201ENST00000384193 109 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 RNU6-988P-201ENST00000519081 107 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 IGKV1-22-201ENST00000524313 326 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 AL359881.1-201ENST00000602916 267 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 AC096720.1-201ENST00000604441 183 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 AL670379.3-201ENST00000605040 251 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 MIR6514-201ENST00000622549 70 ntBASIC-0.51□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 SNORD114-10-201ENST00000363409 72 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 RNU6-103P-201ENST00000363686 107 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 RNU6-449P-201ENST00000383914 107 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 RNU4-70P-201ENST00000384579 139 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 RNU6-429P-201ENST00000384582 108 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 MIR635-201ENST00000384830 98 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 RNU7-113P-201ENST00000459273 62 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 AP001328.1-201ENST00000528550 176 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 MIR3666-201ENST00000607845 111 ntBASIC-0.52□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.53□□□□□ -2.49
ECHDC3Q96DC8 MT-TQ-201ENST00000387372 72 ntBASIC-0.53□□□□□ -2.49
ECHDC3Q96DC8 AC113618.1-201ENST00000416747 285 ntBASIC-0.53□□□□□ -2.49
ECHDC3Q96DC8 SNORD67.1-201ENST00000516618 108 ntBASIC-0.53□□□□□ -2.49
ECHDC3Q96DC8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms