Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-949P-201ENST00000384040 107 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 RPL39P34-201ENST00000477141 156 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 AC027335.2-201ENST00000624030 375 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CTHRC1Q96CG8 MIR30D-201ENST00000362283 70 ntBASIC1.15□□□□□ -2.23
CTHRC1Q96CG8 SNORD114-10-201ENST00000363409 72 ntBASIC1.15□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.362-201ENST00000365518 110 ntBASIC1.15□□□□□ -2.23
CTHRC1Q96CG8 MIR489-201ENST00000384923 84 ntBASIC1.15□□□□□ -2.23
CTHRC1Q96CG8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.15□□□□□ -2.23
CTHRC1Q96CG8 RNU6-616P-201ENST00000384353 107 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.507-201ENST00000384500 99 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-447P-201ENST00000410293 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-1118P-201ENST00000410382 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-1076P-201ENST00000410397 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-355P-201ENST00000410427 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-791P-201ENST00000410467 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-705P-201ENST00000410601 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-1100P-201ENST00000410691 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-860P-201ENST00000410860 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-1217P-201ENST00000411276 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU6-785P-201ENST00000411324 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 SNORD67.1-201ENST00000516618 108 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 U6.90-201ENST00000614007 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 U6.70-201ENST00000620287 104 ntBASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.49-201ENST00000362714 112 ntBASIC1.13□□□□□ -2.23
CTHRC1Q96CG8 SNORA63.5-201ENST00000363548 123 ntBASIC1.13□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.309-201ENST00000365046 111 ntBASIC1.13□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.344-201ENST00000365381 112 ntBASIC1.13□□□□□ -2.23
CTHRC1Q96CG8 MIR1912-201ENST00000410389 80 ntBASIC1.13□□□□□ -2.23
CTHRC1Q96CG8 MIR6129-201ENST00000616087 109 ntBASIC1.13□□□□□ -2.23
CTHRC1Q96CG8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 MIR1-1-201ENST00000362147 71 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.35-201ENST00000362601 101 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 RNU6-1325P-201ENST00000364905 105 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 MIR200A-201ENST00000384875 90 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 SNORD93-201ENST00000408813 74 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 SNORD83.1-201ENST00000411362 77 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 RPS26P5-201ENST00000418544 335 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 MIR1270-201ENST00000459320 83 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 RNU7-137P-201ENST00000516788 62 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 AC133485.1-201ENST00000567176 124 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.773-201ENST00000607168 90 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 RNU6-94P-201ENST00000607728 107 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 AC023934.1-201ENST00000574529 2389 ntBASIC1.12□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.85-201ENST00000363014 111 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.281-201ENST00000364774 94 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 SNORD115-35-201ENST00000365122 82 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 MIR1257-201ENST00000408490 117 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 FABP5P4-201ENST00000437203 171 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 RNU7-185P-201ENST00000459215 60 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 RNU7-2P-201ENST00000516096 62 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 MIR4771-2-201ENST00000577758 74 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 MIR4771-1-201ENST00000582617 74 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 uc_338.6-201ENST00000613544 171 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 AL162726.3-218ENST00000636401 95 ntBASIC1.11□□□□□ -2.23
CTHRC1Q96CG8 RNU6-363P-201ENST00000362895 105 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.98-201ENST00000363109 102 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.155-201ENST00000363632 101 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 RNU4-67P-201ENST00000364569 141 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 RNU6-409P-201ENST00000384114 104 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 Y_RNA.549-201ENST00000384657 102 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 MIR206-201ENST00000384872 86 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 MIR100-201ENST00000385259 80 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 RNU6-816P-201ENST00000390914 107 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 U8.15-201ENST00000390947 134 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 RNU6-1268P-201ENST00000391214 107 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 RNU6-1239P-201ENST00000391310 107 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 snoU13.21-201ENST00000459368 105 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 AL136317.1-201ENST00000612653 226 ntBASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.1□□□□□ -2.23
CTHRC1Q96CG8 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 RNU6-429P-201ENST00000384582 108 ntBASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 RNU6-521P-201ENST00000516663 105 ntBASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 AC068339.1-201ENST00000526965 141 ntBASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 MIR6504-201ENST00000613520 61 ntBASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 AC105081.1-201ENST00000617727 106 ntBASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 MIR1255B1-201ENST00000636325 63 ntBASIC1.09□□□□□ -2.23
CTHRC1Q96CG8 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 RNU6-865P-201ENST00000364772 107 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 RNU1-36P-201ENST00000365130 165 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 SNORD20-201ENST00000384550 80 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 MIR942-201ENST00000401111 86 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 SNORA7.5-201ENST00000410672 110 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 RNU6-733P-201ENST00000410759 104 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms