Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC069271.1-201ENST00000445577 156 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 RNU6-531P-201ENST00000516694 104 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 MIR3149-201ENST00000584629 83 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 AC022709.1-201ENST00000615967 87 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 AC244669.1-204ENST00000621564 178 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 SNORD114-23-201ENST00000363536 72 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 RNU6-312P-201ENST00000364629 107 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 RNU6-768P-201ENST00000384683 107 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 RNU6-1045P-201ENST00000516321 107 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 MIR6755-201ENST00000619993 66 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 U4.1-201ENST00000620349 87 ntBASIC0.07□□□□□ -2.4
VPS33AQ96AX1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.60-201ENST00000362831 98 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 SNORA20.1-201ENST00000364790 130 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 RNU6-818P-201ENST00000364837 108 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 MIR518E-201ENST00000385252 88 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 SNORA75.5-201ENST00000391291 81 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 RNU7-137P-201ENST00000516788 62 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 MIR4305-201ENST00000583252 102 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 U6.109-201ENST00000636749 87 ntBASIC0.06□□□□□ -2.4
VPS33AQ96AX1 MIR101-2-201ENST00000362195 79 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 MIR411-201ENST00000362239 96 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 SNORD114-10-201ENST00000363409 72 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.200-201ENST00000364018 102 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 SNORA32-201ENST00000384072 121 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 AL118496.2-201ENST00000448300 230 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 RNU6-111P-201ENST00000517179 105 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.05□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 RNU6-1020P-201ENST00000363684 107 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.680-201ENST00000516441 93 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 AC138749.4-201ENST00000563970 127 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 MIR548AE2-201ENST00000583456 67 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 MIR6515-201ENST00000619843 57 ntBASIC0.04□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.83-201ENST00000363005 113 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 RNU6-702P-201ENST00000364982 107 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.447-201ENST00000384184 113 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 SNORD67.1-201ENST00000516618 108 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 MIR3646-201ENST00000578301 84 ntBASIC0.03□□□□□ -2.4
VPS33AQ96AX1 Y_RNA.162-201ENST00000363683 102 ntBASIC0.02□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.193-201ENST00000363979 102 ntBASIC0.02□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.362-201ENST00000365518 110 ntBASIC0.02□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
VPS33AQ96AX1 AC244505.6-201ENST00000452829 130 ntBASIC0.02□□□□□ -2.41
VPS33AQ96AX1 RNU1-29P-201ENST00000606574 126 ntBASIC0.02□□□□□ -2.41
VPS33AQ96AX1 AC010487.4-201ENST00000637027 61 ntBASIC0.02□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 RNA5SP245-201ENST00000364239 121 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 RNY1P2-201ENST00000364820 117 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.299-201ENST00000364973 94 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 MIR598-201ENST00000384868 97 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 PCNPP3-201ENST00000393579 471 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 RNU2-35P-201ENST00000516446 142 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 AC138907.4-201ENST00000570107 226 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
VPS33AQ96AX1 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 SNORA63.5-201ENST00000363548 123 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.497-201ENST00000384447 98 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 AC138869.1-201ENST00000568623 124 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 MIR548H5-201ENST00000580314 60 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 AL359881.1-201ENST00000602916 267 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 AC021443.1-201ENST00000604478 211 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 RNU7-10P-201ENST00000607194 63 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 MIR6844-201ENST00000637122 62 ntBASIC0□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 RNU6-429P-201ENST00000384582 108 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 MTND3P2-201ENST00000438452 342 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 RNU6-240P-201ENST00000516098 97 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 SNORA62.5-201ENST00000516634 120 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 AC009779.6-201ENST00000603972 165 ntBASIC-0.01□□□□□ -2.41
VPS33AQ96AX1 SNORD115-24-201ENST00000363528 82 ntBASIC-0.02□□□□□ -2.41
VPS33AQ96AX1 RNA5SP128-201ENST00000365305 116 ntBASIC-0.02□□□□□ -2.41
VPS33AQ96AX1 RNU6-47P-201ENST00000383866 107 ntBASIC-0.02□□□□□ -2.41
VPS33AQ96AX1 RNU6-756P-201ENST00000383997 107 ntBASIC-0.02□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.02□□□□□ -2.41
VPS33AQ96AX1 RNU6-196P-201ENST00000384315 107 ntBASIC-0.02□□□□□ -2.41
VPS33AQ96AX1 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms