Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
SLC44A1Q8WWI5 SNORD92-201ENST00000585078 85 ntBASIC0.77□□□□□ -2.29
SLC44A1Q8WWI5 Y_RNA.114-201ENST00000363265 113 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 MIR520F-201ENST00000384824 87 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 AC015818.7-201ENST00000428754 109 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 AC087499.7-201ENST00000441958 109 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 RNU7-79P-201ENST00000516082 62 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 RNY4P20-201ENST00000516678 93 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 MIR548AE2-201ENST00000583456 67 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 TUG1_4.1-201ENST00000619464 181 ntBASIC0.76□□□□□ -2.29
SLC44A1Q8WWI5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SLC44A1Q8WWI5 U8.15-201ENST00000390947 134 ntBASIC0.75□□□□□ -2.29
SLC44A1Q8WWI5 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
SLC44A1Q8WWI5 RNU5E-3P-201ENST00000515913 68 ntBASIC0.75□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-346P-201ENST00000516288 111 ntBASIC0.75□□□□□ -2.29
SLC44A1Q8WWI5 Y_RNA.703-201ENST00000516846 111 ntBASIC0.75□□□□□ -2.29
SLC44A1Q8WWI5 CYP3A137P-201ENST00000562436 69 ntBASIC0.75□□□□□ -2.29
SLC44A1Q8WWI5 SNORD50.2-201ENST00000365465 70 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-746P-201ENST00000384112 109 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 Y_RNA.540-201ENST00000384638 111 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 SNORA40-201ENST00000388090 126 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 SNORD93-201ENST00000408813 74 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 RNU4-69P-201ENST00000410677 143 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 AC096949.1-201ENST00000412047 152 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 MTND4LP9-201ENST00000427694 174 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 AL158147.1-201ENST00000443970 75 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 RPL39P25-201ENST00000449384 154 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 IGKV1-22-201ENST00000524313 326 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
SLC44A1Q8WWI5 Y_RNA.36-201ENST00000362602 112 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 SNORD114-26-201ENST00000363543 72 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 MIR573-201ENST00000384964 99 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 MIR520H-201ENST00000385126 88 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 RNU1-119P-201ENST00000391122 165 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 RN7SKP19-201ENST00000516016 252 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 RNA5SP436-201ENST00000516020 115 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 RNU7-156P-201ENST00000517214 74 ntBASIC0.73□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-364P-201ENST00000384387 107 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 Y_RNA.588-201ENST00000391254 102 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-257P-201ENST00000410238 98 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-447P-201ENST00000410293 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-355P-201ENST00000410427 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-791P-201ENST00000410467 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-705P-201ENST00000410601 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-860P-201ENST00000410860 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU4-83P-201ENST00000410863 133 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNA5SP136-201ENST00000410906 107 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU6-785P-201ENST00000411324 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 AC244098.3-201ENST00000424803 96 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNU7-102P-201ENST00000458948 62 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 RNA5SP272-201ENST00000516095 111 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 AC090897.1-201ENST00000580909 226 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 U6.90-201ENST00000614007 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 U6.70-201ENST00000620287 104 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.72□□□□□ -2.29
SLC44A1Q8WWI5 Y_RNA.42-201ENST00000362660 108 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 SNORD114-10-201ENST00000363409 72 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 Y_RNA.294-201ENST00000364916 102 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 SNORA32-201ENST00000384072 121 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 MIR1270-201ENST00000459320 83 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 RNU7-137P-201ENST00000516788 62 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 RNU6-765P-201ENST00000516916 99 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 AP003327.1-201ENST00000529684 127 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 MIR8066-201ENST00000617280 78 ntBASIC0.71□□□□□ -2.3
SLC44A1Q8WWI5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 MIR539-201ENST00000365690 78 ntBASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 Y_RNA.586-201ENST00000391146 98 ntBASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 AC022523.2-201ENST00000561045 150 ntBASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 AC011195.1-201ENST00000578177 177 ntBASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 MIR4491-201ENST00000581087 68 ntBASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 MIR3133-201ENST00000583157 78 ntBASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 AC008608.1-201ENST00000603910 127 ntBASIC0.7□□□□□ -2.3
SLC44A1Q8WWI5 RNU4-45P-201ENST00000365469 141 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 RNU6-1104P-201ENST00000384723 104 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 MIRLET7F2-201ENST00000385277 83 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 SNORD77B-201ENST00000391112 67 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 SNORD100-201ENST00000408573 76 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 RNU6-1194P-201ENST00000516208 104 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 AL359881.1-201ENST00000602916 267 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.69□□□□□ -2.3
SLC44A1Q8WWI5 Y_RNA.198-201ENST00000364013 98 ntBASIC0.68□□□□□ -2.3
SLC44A1Q8WWI5 SNORD67.1-201ENST00000516618 108 ntBASIC0.68□□□□□ -2.3
SLC44A1Q8WWI5 MIR4714-201ENST00000580728 77 ntBASIC0.68□□□□□ -2.3
SLC44A1Q8WWI5 MIR6082-201ENST00000613604 109 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 464.8 ms