Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MIR125B2-201ENST00000385128 89 ntBASIC0.82□□□□□ -2.28
USP38Q8NB14 AL022718.1-201ENST00000412004 84 ntBASIC0.82□□□□□ -2.28
USP38Q8NB14 AC112693.2-201ENST00000556538 232 ntBASIC0.82□□□□□ -2.28
USP38Q8NB14 Y_RNA.757-201ENST00000578934 114 ntBASIC0.82□□□□□ -2.28
USP38Q8NB14 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-349P-201ENST00000362402 107 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 SNORD116-18-201ENST00000383961 92 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-886P-201ENST00000384319 105 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-447P-201ENST00000410293 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-1118P-201ENST00000410382 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-1076P-201ENST00000410397 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-355P-201ENST00000410427 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-791P-201ENST00000410467 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-705P-201ENST00000410601 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-1100P-201ENST00000410691 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNA5SP144-201ENST00000410846 116 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-860P-201ENST00000410860 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-1217P-201ENST00000411276 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-785P-201ENST00000411324 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU7-113P-201ENST00000459273 62 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-240P-201ENST00000516098 97 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNA5SP285-201ENST00000516619 119 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU7-156P-201ENST00000517214 74 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 U6.90-201ENST00000614007 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 U6.70-201ENST00000620287 104 ntBASIC0.81□□□□□ -2.28
USP38Q8NB14 RNU6-449P-201ENST00000383914 107 ntBASIC0.8□□□□□ -2.28
USP38Q8NB14 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
USP38Q8NB14 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
USP38Q8NB14 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
USP38Q8NB14 RNU7-56P-201ENST00000458744 62 ntBASIC0.8□□□□□ -2.28
USP38Q8NB14 Y_RNA.686-201ENST00000516548 134 ntBASIC0.8□□□□□ -2.28
USP38Q8NB14 AC141846.1-201ENST00000568348 142 ntBASIC0.8□□□□□ -2.28
USP38Q8NB14 RNA5SP347-201ENST00000362445 119 ntBASIC0.79□□□□□ -2.28
USP38Q8NB14 RNU6-403P-201ENST00000363163 104 ntBASIC0.79□□□□□ -2.28
USP38Q8NB14 RNU6-309P-201ENST00000364573 106 ntBASIC0.79□□□□□ -2.28
USP38Q8NB14 RNU7-102P-201ENST00000458948 62 ntBASIC0.79□□□□□ -2.28
USP38Q8NB14 Y_RNA.690-201ENST00000516603 95 ntBASIC0.79□□□□□ -2.28
USP38Q8NB14 RNA5SP33-201ENST00000516687 98 ntBASIC0.79□□□□□ -2.28
USP38Q8NB14 Y_RNA.398-201ENST00000383952 99 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 MIR573-201ENST00000384964 99 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 RNU4-83P-201ENST00000410863 133 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 Y_RNA.651-201ENST00000459380 103 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 AC133485.4-201ENST00000561835 220 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 AC138907.4-201ENST00000570107 226 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 MIR3144-201ENST00000579460 79 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 AC021443.1-201ENST00000604478 211 ntBASIC0.78□□□□□ -2.28
USP38Q8NB14 SNORA32-201ENST00000384072 121 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 Y_RNA.580-201ENST00000391004 95 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 MIR513C-201ENST00000401352 84 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 RNU6-1086P-201ENST00000410930 100 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 RNU7-197P-201ENST00000458836 62 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 MTND5P41-201ENST00000517498 206 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 MIR4305-201ENST00000583252 102 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 AC008608.1-201ENST00000603910 127 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 AC011603.4-201ENST00000611325 277 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 Y_RNA.778-201ENST00000620203 90 ntBASIC0.77□□□□□ -2.29
USP38Q8NB14 RNA5SP499-201ENST00000363982 119 ntBASIC0.76□□□□□ -2.29
USP38Q8NB14 Y_RNA.470-201ENST00000384307 117 ntBASIC0.76□□□□□ -2.29
USP38Q8NB14 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
USP38Q8NB14 RNU6-460P-201ENST00000391158 108 ntBASIC0.76□□□□□ -2.29
USP38Q8NB14 AL512326.2-201ENST00000426359 151 ntBASIC0.76□□□□□ -2.29
USP38Q8NB14 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.76□□□□□ -2.29
USP38Q8NB14 AC021753.1-201ENST00000635724 168 ntBASIC0.76□□□□□ -2.29
USP38Q8NB14 SNORA72.6-201ENST00000384520 129 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 RNU6-907P-201ENST00000390924 102 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 U8.15-201ENST00000390947 134 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 RNU7-164P-201ENST00000459221 62 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 SNORA25.12-201ENST00000516202 82 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 RNU2-35P-201ENST00000516446 142 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 MIR3612-201ENST00000579753 87 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 AC098479.1-201ENST00000609225 154 ntBASIC0.75□□□□□ -2.29
USP38Q8NB14 Y_RNA.120-201ENST00000363304 110 ntBASIC0.74□□□□□ -2.29
USP38Q8NB14 RNU7-79P-201ENST00000516082 62 ntBASIC0.74□□□□□ -2.29
USP38Q8NB14 SNORD92-201ENST00000585078 85 ntBASIC0.74□□□□□ -2.29
USP38Q8NB14 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
USP38Q8NB14 RNU6-949P-201ENST00000384040 107 ntBASIC0.73□□□□□ -2.29
USP38Q8NB14 AL603914.1-201ENST00000401964 204 ntBASIC0.73□□□□□ -2.29
USP38Q8NB14 COX6CP6-201ENST00000490840 228 ntBASIC0.73□□□□□ -2.29
USP38Q8NB14 RNA5SP272-201ENST00000516095 111 ntBASIC0.73□□□□□ -2.29
USP38Q8NB14 RNY1P13-201ENST00000365030 105 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 RNY1P8-201ENST00000383970 114 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 Y_RNA.531-201ENST00000384589 121 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 Y_RNA.555-201ENST00000384673 110 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 AC092628.1-201ENST00000436250 252 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 RNU6-229P-201ENST00000516614 102 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 MIR4636-201ENST00000582271 80 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 AC108081.1-201ENST00000604358 221 ntBASIC0.72□□□□□ -2.29
USP38Q8NB14 Y_RNA.13-201ENST00000362403 112 ntBASIC0.71□□□□□ -2.3
USP38Q8NB14 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
USP38Q8NB14 Y_RNA.366-201ENST00000365540 102 ntBASIC0.71□□□□□ -2.3
USP38Q8NB14 MIR1265-201ENST00000408444 86 ntBASIC0.71□□□□□ -2.3
USP38Q8NB14 AC096949.1-201ENST00000412047 152 ntBASIC0.71□□□□□ -2.3
USP38Q8NB14 AC090897.1-201ENST00000580909 226 ntBASIC0.71□□□□□ -2.3
USP38Q8NB14 MIR548AE2-201ENST00000583456 67 ntBASIC0.71□□□□□ -2.3
USP38Q8NB14 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
USP38Q8NB14 Y_RNA.180-201ENST00000363867 113 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 RNU6-915P-201ENST00000364943 103 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms