Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNU1-17P-201ENST00000363022 152 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 RNU6-1125P-201ENST00000363601 107 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 Y_RNA.168-201ENST00000363740 102 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 RNU6-573P-201ENST00000383938 106 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 RNU6-480P-201ENST00000384332 107 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 RNU6-242P-201ENST00000384359 107 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SIX5Q8N196 RNU6-402P-201ENST00000410678 103 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 AP003327.1-201ENST00000529684 127 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 MIR1245B-201ENST00000636115 69 ntBASIC2.28□□□□□ -2.04
SIX5Q8N196 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.28□□□□□ -2.04
SIX5Q8N196 SNORD1A-201ENST00000364968 72 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 MIR563-201ENST00000385080 79 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 MIR676-201ENST00000390702 67 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 HMGN2P38-201ENST00000423806 265 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 RNU1-98P-201ENST00000458992 160 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 AC022137.1-201ENST00000483735 151 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 MIR4498-201ENST00000577599 66 ntBASIC2.27□□□□□ -2.05
SIX5Q8N196 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
SIX5Q8N196 RNA5SP264-201ENST00000363115 107 ntBASIC2.26□□□□□ -2.05
SIX5Q8N196 RNU6-1152P-201ENST00000384576 107 ntBASIC2.26□□□□□ -2.05
SIX5Q8N196 MT-TF-201ENST00000387314 71 ntBASIC2.26□□□□□ -2.05
SIX5Q8N196 MIR1287-201ENST00000408492 90 ntBASIC2.26□□□□□ -2.05
SIX5Q8N196 RNU6-592P-201ENST00000411333 103 ntBASIC2.26□□□□□ -2.05
SIX5Q8N196 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.26□□□□□ -2.05
SIX5Q8N196 MIR6516-201ENST00000630554 81 ntBASIC2.26□□□□□ -2.05
SIX5Q8N196 U6.109-201ENST00000636749 87 ntBASIC2.26□□□□□ -2.05
SIX5Q8N196 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SIX5Q8N196 Y_RNA.173-201ENST00000363776 113 ntBASIC2.25□□□□□ -2.05
SIX5Q8N196 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
SIX5Q8N196 AC090897.1-201ENST00000580909 226 ntBASIC2.25□□□□□ -2.05
SIX5Q8N196 MIR4668-201ENST00000582284 70 ntBASIC2.25□□□□□ -2.05
SIX5Q8N196 MIR4781-201ENST00000585250 76 ntBASIC2.25□□□□□ -2.05
SIX5Q8N196 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
SIX5Q8N196 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
SIX5Q8N196 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SIX5Q8N196 HSBP1P2-201ENST00000299671 229 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 MIR377-201ENST00000362145 69 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 MIR302D-201ENST00000362275 68 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 RNU6-675P-201ENST00000384236 104 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 RNY1P4-201ENST00000384595 115 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 MIR1185-1-201ENST00000408598 86 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 RNU6-613P-201ENST00000410412 108 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 snoU13.25-201ENST00000458945 104 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 MIR3198-2-201ENST00000577868 80 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 MIR4500-201ENST00000579472 76 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.24□□□□□ -2.05
SIX5Q8N196 AL096840.1-201ENST00000603287 93 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 MIR6845-201ENST00000613182 61 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
SIX5Q8N196 RNA5SP133-201ENST00000363368 119 ntBASIC2.23□□□□□ -2.05
SIX5Q8N196 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
SIX5Q8N196 AC138749.4-201ENST00000563970 127 ntBASIC2.23□□□□□ -2.05
SIX5Q8N196 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIX5Q8N196 MIR30D-201ENST00000362283 70 ntBASIC2.22□□□□□ -2.05
SIX5Q8N196 Y_RNA.73-201ENST00000362910 113 ntBASIC2.22□□□□□ -2.05
SIX5Q8N196 Y_RNA.219-201ENST00000364232 113 ntBASIC2.22□□□□□ -2.05
SIX5Q8N196 RNU6-497P-201ENST00000365316 104 ntBASIC2.22□□□□□ -2.05
SIX5Q8N196 Y_RNA.609-201ENST00000410669 89 ntBASIC2.22□□□□□ -2.05
SIX5Q8N196 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIX5Q8N196 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SIX5Q8N196 MIR583-201ENST00000384846 75 ntBASIC2.21□□□□□ -2.06
SIX5Q8N196 MIR181B2-201ENST00000385004 89 ntBASIC2.21□□□□□ -2.06
SIX5Q8N196 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
SIX5Q8N196 AP003716.2-201ENST00000528260 108 ntBASIC2.21□□□□□ -2.06
SIX5Q8N196 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
SIX5Q8N196 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SIX5Q8N196 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 RNU6-654P-201ENST00000364373 107 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 RNU6-53P-201ENST00000365367 106 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 SNORA2B-201ENST00000384583 137 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 RNA5SP95-201ENST00000410319 137 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 Y_RNA.620-201ENST00000411009 88 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 AC108667.1-201ENST00000428618 249 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 AC245517.4-201ENST00000448601 281 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 RNU6-267P-201ENST00000516714 103 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 MIR3664-201ENST00000579074 99 ntBASIC2.2□□□□□ -2.06
SIX5Q8N196 Y_RNA.119-201ENST00000363301 96 ntBASIC2.19□□□□□ -2.06
SIX5Q8N196 RNU6-219P-201ENST00000364728 107 ntBASIC2.19□□□□□ -2.06
SIX5Q8N196 AL513043.2-201ENST00000573941 143 ntBASIC2.19□□□□□ -2.06
SIX5Q8N196 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
SIX5Q8N196 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
SIX5Q8N196 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SIX5Q8N196 Y_RNA.57-201ENST00000362806 113 ntBASIC2.18□□□□□ -2.06
SIX5Q8N196 RNU6-1276P-201ENST00000365372 104 ntBASIC2.18□□□□□ -2.06
SIX5Q8N196 MIR8066-201ENST00000617280 78 ntBASIC2.18□□□□□ -2.06
SIX5Q8N196 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SIX5Q8N196 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SIX5Q8N196 Y_RNA.118-201ENST00000363300 101 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 SNORD93-201ENST00000408813 74 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 MIR18B-201ENST00000454574 71 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 AL512310.8-201ENST00000550183 120 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 MIR5588-201ENST00000581890 63 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 AC025521.1-201ENST00000621624 286 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 MIR3202-2-201ENST00000635980 79 ntBASIC2.17□□□□□ -2.06
SIX5Q8N196 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SIX5Q8N196 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms