Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 RNY1P13-201ENST00000365030 105 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 snoU13.21-201ENST00000459368 105 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 MIR4679-2-201ENST00000578358 77 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.49□□□□□ -2.17
DDX53Q86TM3 FAM71BP1-201ENST00000604431 523 ntBASIC1.49□□□□□ -2.17
DDX53Q86TM3 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
DDX53Q86TM3 SNORD67.1-201ENST00000516618 108 ntBASIC1.48□□□□□ -2.17
DDX53Q86TM3 AC106800.4-201ENST00000614905 153 ntBASIC1.48□□□□□ -2.17
DDX53Q86TM3 AC012676.2-201ENST00000619258 186 ntBASIC1.48□□□□□ -2.17
DDX53Q86TM3 MIR1255B1-201ENST00000636325 63 ntBASIC1.48□□□□□ -2.17
DDX53Q86TM3 AL589743.1-201ENST00000551932 2712 ntBASIC1.48□□□□□ -2.17
DDX53Q86TM3 RNU6-215P-201ENST00000365169 102 ntBASIC1.47□□□□□ -2.17
DDX53Q86TM3 RNU6-53P-201ENST00000365367 106 ntBASIC1.47□□□□□ -2.17
DDX53Q86TM3 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
DDX53Q86TM3 RNU6-589P-201ENST00000516485 107 ntBASIC1.47□□□□□ -2.17
DDX53Q86TM3 RNU6-94P-201ENST00000607728 107 ntBASIC1.47□□□□□ -2.17
DDX53Q86TM3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
DDX53Q86TM3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
DDX53Q86TM3 SNORD111-201ENST00000408139 94 ntBASIC1.46□□□□□ -2.18
DDX53Q86TM3 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
DDX53Q86TM3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 RNU6-949P-201ENST00000384040 107 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 MT-TF-201ENST00000387314 71 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 SNORD83.1-201ENST00000411362 77 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 AC063976.4-201ENST00000421971 163 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 AC002429.1-201ENST00000437672 148 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 RPL39P25-201ENST00000449384 154 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 RNU7-137P-201ENST00000516788 62 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 AC022709.1-201ENST00000615967 87 ntBASIC1.45□□□□□ -2.18
DDX53Q86TM3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
DDX53Q86TM3 MIR206-201ENST00000384872 86 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 MIR18B-201ENST00000454574 71 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 RPL39P34-201ENST00000477141 156 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 RNU6-412P-201ENST00000516434 106 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.44□□□□□ -2.18
DDX53Q86TM3 AC105081.1-201ENST00000617727 106 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 MIR6515-201ENST00000619843 57 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 AL162726.3-218ENST00000636401 95 ntBASIC1.44□□□□□ -2.18
DDX53Q86TM3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
DDX53Q86TM3 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 RNU6-816P-201ENST00000390914 107 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 AC015818.7-201ENST00000428754 109 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 AC087499.7-201ENST00000441958 109 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 RNU6-919P-201ENST00000516731 104 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
DDX53Q86TM3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
DDX53Q86TM3 SNORD114-10-201ENST00000363409 72 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 RNU4-67P-201ENST00000364569 141 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 RNU6-934P-201ENST00000365154 107 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 U8.15-201ENST00000390947 134 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 RNY4P18-201ENST00000391107 89 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 RNU6-994P-201ENST00000410507 111 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 RNU7-2P-201ENST00000516096 62 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.42□□□□□ -2.18
DDX53Q86TM3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
DDX53Q86TM3 AC023934.1-201ENST00000574529 2389 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 RNU6-363P-201ENST00000362895 105 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 SNORA7.5-201ENST00000410672 110 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 AL035461.1-201ENST00000421490 332 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 RNU7-40P-201ENST00000516397 64 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 RNU6-521P-201ENST00000516663 105 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 AC068339.1-201ENST00000526965 141 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 MIR4771-2-201ENST00000577758 74 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 MIR4771-1-201ENST00000582617 74 ntBASIC1.41□□□□□ -2.18
DDX53Q86TM3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
DDX53Q86TM3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 U8.6-201ENST00000364939 135 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 SNORD115-35-201ENST00000365122 82 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 SNORA22-201ENST00000383907 134 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 MIR1912-201ENST00000410389 80 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.4□□□□□ -2.19
DDX53Q86TM3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.39□□□□□ -2.19
DDX53Q86TM3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.39□□□□□ -2.19
DDX53Q86TM3 SNORD93-201ENST00000408813 74 ntBASIC1.39□□□□□ -2.19
DDX53Q86TM3 RNU7-185P-201ENST00000459215 60 ntBASIC1.39□□□□□ -2.19
DDX53Q86TM3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.39□□□□□ -2.19
DDX53Q86TM3 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
DDX53Q86TM3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
DDX53Q86TM3 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
DDX53Q86TM3 RNU6-44P-201ENST00000384045 107 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms