Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AL161932.1-201ENST00000437408 146 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 RNU7-48P-201ENST00000458875 63 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 RNU1-98P-201ENST00000458992 160 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 SNORA31.17-201ENST00000516953 127 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 SNORA31.25-201ENST00000517242 134 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 AC019288.1-201ENST00000557918 224 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 MIR4524B-201ENST00000581569 115 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 AC105081.1-201ENST00000617727 106 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.85□□□□□ -2.11
LIMS2Q7Z4I7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LIMS2Q7Z4I7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.11
LIMS2Q7Z4I7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMS2Q7Z4I7 CYP3A52P-201ENST00000563326 91 ntBASIC1.84□□□□□ -2.11
LIMS2Q7Z4I7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMS2Q7Z4I7 SNORD115-27-201ENST00000364430 82 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-652P-201ENST00000365488 107 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 AC004965.1-201ENST00000413033 213 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 AL161935.2-201ENST00000414627 60 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 AC055731.1-201ENST00000474387 401 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 AC108210.2-201ENST00000503681 201 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 AL513043.2-201ENST00000573941 143 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 AC012676.2-201ENST00000619258 186 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 MIR4251-201ENST00000635819 61 ntBASIC1.83□□□□□ -2.12
LIMS2Q7Z4I7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 HSBP1P2-201ENST00000299671 229 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 Y_RNA.94-201ENST00000363068 106 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 Y_RNA.316-201ENST00000365118 111 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 SNORA2B-201ENST00000384583 137 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 SNORD38B-201ENST00000384690 67 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 RNU7-41P-201ENST00000515917 61 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-65P-201ENST00000516332 98 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 AP001362.1-201ENST00000625165 124 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 SNORD38B-202ENST00000625943 69 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LIMS2Q7Z4I7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 SNORD38.2-201ENST00000384470 69 ntBASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 MIR181B2-201ENST00000385004 89 ntBASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 AC244023.1-201ENST00000426884 112 ntBASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 SPINT5P-201ENST00000448174 155 ntBASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 AC141846.1-201ENST00000568348 142 ntBASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 AC242498.1-201ENST00000604134 111 ntBASIC1.81□□□□□ -2.12
LIMS2Q7Z4I7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LIMS2Q7Z4I7 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
LIMS2Q7Z4I7 RNA5SP133-201ENST00000363368 119 ntBASIC1.8□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-524P-201ENST00000384270 107 ntBASIC1.8□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-237P-201ENST00000515985 71 ntBASIC1.8□□□□□ -2.12
LIMS2Q7Z4I7 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
LIMS2Q7Z4I7 AL662814.1-201ENST00000617364 121 ntBASIC1.8□□□□□ -2.12
LIMS2Q7Z4I7 RNY1P2-201ENST00000364820 117 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-480P-201ENST00000384332 107 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 AC009474.2-201ENST00000451383 136 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 RNA5SP445-201ENST00000515889 115 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 RNU2-19P-201ENST00000517288 84 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 MIR4769-201ENST00000584126 77 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 MIR4662A-201ENST00000637499 67 ntBASIC1.79□□□□□ -2.12
LIMS2Q7Z4I7 WWP1P1-201ENST00000466609 2769 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 RNA5SP432-201ENST00000362480 116 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-776P-201ENST00000364403 104 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-1022P-201ENST00000365049 104 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-949P-201ENST00000384040 107 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-482P-201ENST00000391068 107 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 SNORA17.3-201ENST00000391159 129 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 MIR1302-7-201ENST00000408841 72 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 AC093729.1-201ENST00000513074 128 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 RNU6-322P-201ENST00000516010 103 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 MTND5P40-201ENST00000559945 246 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.78□□□□□ -2.12
LIMS2Q7Z4I7 MIR519C-201ENST00000385053 87 ntBASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 MIR563-201ENST00000385080 79 ntBASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 SNORD41-201ENST00000386967 70 ntBASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 AC087499.7-201ENST00000441958 109 ntBASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 snoU13.2-201ENST00000459201 104 ntBASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 AC140658.3-201ENST00000567603 271 ntBASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 AP000942.3-201ENST00000603702 160 ntBASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LIMS2Q7Z4I7 SNORD13-201ENST00000459299 104 ntBASIC1.76□□□□□ -2.13
LIMS2Q7Z4I7 MIR4712-201ENST00000583750 82 ntBASIC1.76□□□□□ -2.13
LIMS2Q7Z4I7 MIR3192-201ENST00000584920 77 ntBASIC1.76□□□□□ -2.13
LIMS2Q7Z4I7 RNA5SP48-201ENST00000363969 126 ntBASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 RNA5SP99-201ENST00000364020 114 ntBASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 SNRPGP12-201ENST00000449481 213 ntBASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 AC133485.1-201ENST00000567176 124 ntBASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms