Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-396P-201ENST00000365369 105 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 MIR548U-201ENST00000390728 81 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 AL359511.1-201ENST00000402970 211 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 MIR1261-201ENST00000408659 82 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 AC245517.4-201ENST00000448601 281 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-634P-201ENST00000459134 106 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 RNU7-106P-201ENST00000459514 67 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 SNORD92-201ENST00000585078 85 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 AC067747.1-201ENST00000608026 250 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 MIR664A-201ENST00000626086 82 ntBASIC2.45□□□□□ -2.02
LYSMD3Q7Z3D4 MIRLET7F1-201ENST00000362202 87 ntBASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-208P-201ENST00000362431 107 ntBASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 RNA5SP259-201ENST00000365541 109 ntBASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-466P-201ENST00000391224 103 ntBASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 MIR1265-201ENST00000408444 86 ntBASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 AC015818.7-201ENST00000428754 109 ntBASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 MIR4264-201ENST00000583520 66 ntBASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.44□□□□□ -2.02
LYSMD3Q7Z3D4 SNORA25.3-201ENST00000363205 127 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 MIR513A1-201ENST00000385138 129 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-205P-201ENST00000390858 107 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 SNORD90-201ENST00000391145 111 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-922P-201ENST00000516753 99 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 uc_338.6-201ENST00000613544 171 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LYSMD3Q7Z3D4 RNU5F-1-201ENST00000362507 117 ntBASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-957P-201ENST00000363652 99 ntBASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 AL161935.2-201ENST00000414627 60 ntBASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 AC074348.1-201ENST00000426503 132 ntBASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 RNU7-62P-201ENST00000458856 62 ntBASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-531P-201ENST00000516694 104 ntBASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-303P-201ENST00000517091 106 ntBASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
LYSMD3Q7Z3D4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LYSMD3Q7Z3D4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
LYSMD3Q7Z3D4 Y_RNA.386-201ENST00000383913 105 ntBASIC2.41□□□□□ -2.02
LYSMD3Q7Z3D4 RNU1-41P-201ENST00000516161 162 ntBASIC2.41□□□□□ -2.02
LYSMD3Q7Z3D4 RNU1-48P-201ENST00000516400 162 ntBASIC2.41□□□□□ -2.02
LYSMD3Q7Z3D4 MIR4446-201ENST00000578505 67 ntBASIC2.41□□□□□ -2.02
LYSMD3Q7Z3D4 RNU6-649P-201ENST00000384463 107 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 MIR518E-201ENST00000385252 88 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 MT-TF-201ENST00000387314 71 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 RNU6-587P-201ENST00000391282 106 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 SNORD63B-201ENST00000411005 70 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 AC026436.1-201ENST00000510537 270 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 SNORA25.16-201ENST00000516741 121 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 SNORA31.25-201ENST00000517242 134 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 MIR1291-201ENST00000627649 87 ntBASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LYSMD3Q7Z3D4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 ZNF658B-202ENST00000615961 3375 ntBASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 U8.2-201ENST00000363156 134 ntBASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 RNA5SP393-201ENST00000363423 117 ntBASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 MIR4491-201ENST00000581087 68 ntBASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LYSMD3Q7Z3D4 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 Y_RNA.12-201ENST00000362393 112 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 RNU4-58P-201ENST00000363192 141 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 MT-TN-201ENST00000387400 73 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 Y_RNA.596-201ENST00000410462 109 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 snoU13.25-201ENST00000458945 104 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 MIR2115-201ENST00000516657 100 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
LYSMD3Q7Z3D4 MIR21-201ENST00000362134 72 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 RNU6-540P-201ENST00000384622 101 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 RNA5SP425-201ENST00000410336 112 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 RNU4-53P-201ENST00000410828 140 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 snoU13.17-201ENST00000458802 104 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 RPL30P7-201ENST00000479312 323 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 RN7SL274P-201ENST00000492268 272 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 RNU6-1194P-201ENST00000516208 104 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 YWHAEP2-201ENST00000580066 112 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 YWHAEP3-201ENST00000582767 121 ntBASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LYSMD3Q7Z3D4 U8.13-201ENST00000390842 128 ntBASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 Y_RNA.588-201ENST00000391254 102 ntBASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 SNORD30.1-201ENST00000391309 70 ntBASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 SNORA3.2-201ENST00000408221 125 ntBASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 RNU2-59P-201ENST00000410482 191 ntBASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 JTBP1-201ENST00000441314 247 ntBASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
LYSMD3Q7Z3D4 RNU6-53P-201ENST00000365367 106 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms