Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 SNORD67.1-201ENST00000516618 108 ntBASIC-0.77□□□□□ -2.53
SSX9Q7RTT3 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 RNU6-101P-201ENST00000410323 104 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 RNA5SP33-201ENST00000516687 98 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 RNU7-137P-201ENST00000516788 62 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 RNU7-10P-201ENST00000607194 63 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 AC098479.1-201ENST00000609225 154 ntBASIC-0.78□□□□□ -2.53
SSX9Q7RTT3 RNU6-728P-201ENST00000365375 104 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 MIR599-201ENST00000385069 95 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 RNY3P15-201ENST00000516297 97 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 SCARNA15-202ENST00000516881 127 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.79□□□□□ -2.54
SSX9Q7RTT3 RNU6-770P-201ENST00000363929 105 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 RNU6-865P-201ENST00000364772 107 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 RNU6-429P-201ENST00000384582 108 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 MIR635-201ENST00000384830 98 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 RNA5SP144-201ENST00000410846 116 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 AC244250.2-201ENST00000418731 148 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 SERF1AP1-201ENST00000514575 187 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 AC006504.6-201ENST00000590142 199 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 AC090971.5-201ENST00000621102 293 ntBASIC-0.8□□□□□ -2.54
SSX9Q7RTT3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 RNU6-806P-201ENST00000365147 105 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 RNU6-811P-201ENST00000384069 107 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 RNY1P6-201ENST00000384193 109 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 ELOCP20-201ENST00000422460 345 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 AC114755.3-201ENST00000481111 251 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 AC074198.2-201ENST00000508153 258 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 RNU6-570P-201ENST00000517051 105 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 AL359881.1-201ENST00000602916 267 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 MIR6086-201ENST00000638065 55 ntBASIC-0.81□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 RNU6-449P-201ENST00000383914 107 ntBASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 TRAJ51-201ENST00000504127 63 ntBASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 MIR6507-201ENST00000613630 70 ntBASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.82□□□□□ -2.54
SSX9Q7RTT3 SNORD114-10-201ENST00000363409 72 ntBASIC-0.83□□□□□ -2.54
SSX9Q7RTT3 RNU4-84P-201ENST00000364200 139 ntBASIC-0.83□□□□□ -2.54
SSX9Q7RTT3 U8.6-201ENST00000364939 135 ntBASIC-0.83□□□□□ -2.54
SSX9Q7RTT3 SNORD116-25-201ENST00000516517 92 ntBASIC-0.83□□□□□ -2.54
SSX9Q7RTT3 MIR655-201ENST00000362159 97 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 MT-TQ-201ENST00000387372 72 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 AL391099.1-201ENST00000624635 187 ntBASIC-0.84□□□□□ -2.54
SSX9Q7RTT3 SNORD115-2-201ENST00000362842 82 ntBASIC-0.85□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.85□□□□□ -2.55
SSX9Q7RTT3 SNORD115-20-201ENST00000365099 82 ntBASIC-0.85□□□□□ -2.55
SSX9Q7RTT3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.85□□□□□ -2.55
SSX9Q7RTT3 AC097635.1-201ENST00000450678 155 ntBASIC-0.85□□□□□ -2.55
SSX9Q7RTT3 MIR4432-201ENST00000581823 84 ntBASIC-0.85□□□□□ -2.55
SSX9Q7RTT3 MIR548AE2-201ENST00000583456 67 ntBASIC-0.85□□□□□ -2.55
SSX9Q7RTT3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.86□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.86□□□□□ -2.55
SSX9Q7RTT3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.86□□□□□ -2.55
SSX9Q7RTT3 RNA5SP205-201ENST00000364653 136 ntBASIC-0.86□□□□□ -2.55
SSX9Q7RTT3 RNU6-381P-201ENST00000391259 108 ntBASIC-0.86□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.86□□□□□ -2.55
SSX9Q7RTT3 MIR4500-201ENST00000579472 76 ntBASIC-0.86□□□□□ -2.55
SSX9Q7RTT3 MIR369-201ENST00000362155 70 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 MIR624-201ENST00000385217 97 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 RNU4-43P-201ENST00000410628 137 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 RNU6-651P-201ENST00000411040 105 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 RNU6-875P-201ENST00000516488 106 ntBASIC-0.87□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 RNU6-978P-201ENST00000364371 103 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 RNU6-735P-201ENST00000410612 107 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 RBMX2P4-201ENST00000441256 376 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 MTND5P22-201ENST00000458380 195 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 MIR3920-201ENST00000581751 86 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 MIR4473-201ENST00000583731 91 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.88□□□□□ -2.55
SSX9Q7RTT3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.89□□□□□ -2.55
SSX9Q7RTT3 RNY4P3-201ENST00000365254 95 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms