Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 RNA5SP33-201ENST00000516687 98 ntBASIC0.67□□□□□ -2.3
CDHR3Q6ZTQ4 AC011603.4-201ENST00000611325 277 ntBASIC0.67□□□□□ -2.3
CDHR3Q6ZTQ4 AL136317.1-201ENST00000612653 226 ntBASIC0.67□□□□□ -2.3
CDHR3Q6ZTQ4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CDHR3Q6ZTQ4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 AL022718.1-201ENST00000412004 84 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 AC244098.3-201ENST00000424803 96 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 MTND4LP9-201ENST00000427694 174 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 RNA5SP436-201ENST00000516020 115 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 RNY4P20-201ENST00000516678 93 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 AP001328.1-201ENST00000528550 176 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 AL359881.1-201ENST00000602916 267 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 AP001340.1-201ENST00000624405 217 ntBASIC0.66□□□□□ -2.3
CDHR3Q6ZTQ4 SNORD115-2-201ENST00000362842 82 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 SNORD115-20-201ENST00000365099 82 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 RNY1P8-201ENST00000383970 114 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 MIR125B2-201ENST00000385128 89 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 MT-TF-201ENST00000387314 71 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 RNU7-102P-201ENST00000458948 62 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 RNU7-79P-201ENST00000516082 62 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 RNU7-35P-201ENST00000517174 62 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 AL137067.1-201ENST00000615933 120 ntBASIC0.65□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-949P-201ENST00000384040 107 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 MIR1257-201ENST00000408490 117 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 SNORD93-201ENST00000408813 74 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-257P-201ENST00000410238 98 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 Y_RNA.692-201ENST00000516627 105 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 RNU7-156P-201ENST00000517214 74 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 AC011195.1-201ENST00000578177 177 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 MIR3133-201ENST00000583157 78 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 MIR8066-201ENST00000617280 78 ntBASIC0.64□□□□□ -2.31
CDHR3Q6ZTQ4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-235P-201ENST00000362644 107 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-187P-201ENST00000384139 106 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 MIR598-201ENST00000384868 97 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 MIR613-201ENST00000385248 95 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-781P-201ENST00000516377 101 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 MIR4491-201ENST00000581087 68 ntBASIC0.63□□□□□ -2.31
CDHR3Q6ZTQ4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 RNY1P5-201ENST00000383890 115 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 MIR938-201ENST00000401216 83 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-893P-201ENST00000458841 100 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 RN7SKP19-201ENST00000516016 252 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 SNORD67.1-201ENST00000516618 108 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 SNORD92-201ENST00000585078 85 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.62□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-403P-201ENST00000363163 104 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-364P-201ENST00000384387 107 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 Y_RNA.525-201ENST00000384570 113 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 MIR573-201ENST00000384964 99 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 RNU1-119P-201ENST00000391122 165 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-735P-201ENST00000410612 107 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 RNU4-83P-201ENST00000410863 133 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 AL158147.1-201ENST00000443970 75 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 SNORA25.16-201ENST00000516741 121 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 RNU7-137P-201ENST00000516788 62 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 AC105081.1-201ENST00000617727 106 ntBASIC0.61□□□□□ -2.31
CDHR3Q6ZTQ4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.6□□□□□ -2.31
CDHR3Q6ZTQ4 RNU6-1062P-201ENST00000383908 107 ntBASIC0.6□□□□□ -2.31
CDHR3Q6ZTQ4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CDHR3Q6ZTQ4 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
CDHR3Q6ZTQ4 U7.2-201ENST00000607576 63 ntBASIC0.6□□□□□ -2.31
CDHR3Q6ZTQ4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CDHR3Q6ZTQ4 MIR1263-201ENST00000408324 86 ntBASIC0.59□□□□□ -2.31
CDHR3Q6ZTQ4 MIR3612-201ENST00000579753 87 ntBASIC0.59□□□□□ -2.31
CDHR3Q6ZTQ4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.59□□□□□ -2.31
CDHR3Q6ZTQ4 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 Y_RNA.586-201ENST00000391146 98 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-447P-201ENST00000410293 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-355P-201ENST00000410427 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-791P-201ENST00000410467 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-705P-201ENST00000410601 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU4-69P-201ENST00000410677 143 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-860P-201ENST00000410860 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-785P-201ENST00000411324 104 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 Y_RNA.630-201ENST00000411370 108 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RPL39P25-201ENST00000449384 154 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 RNU6-971P-201ENST00000516920 106 ntBASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.58□□□□□ -2.32
CDHR3Q6ZTQ4 MTND5P34-201ENST00000568888 325 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms