Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.120-201ENST00000363304 110 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 RNA5SP325-201ENST00000363756 130 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 RNY1P13-201ENST00000365030 105 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 AC002350.1-201ENST00000490759 375 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 AC074198.2-201ENST00000508153 258 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 RNU6-448P-201ENST00000517052 107 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 AC112693.2-201ENST00000556538 232 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 AC133485.4-201ENST00000561835 220 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 AC138907.4-201ENST00000570107 226 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 MIR4305-201ENST00000583252 102 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 MIR8066-201ENST00000617280 78 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.42-201ENST00000362660 108 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 RNY1P11-201ENST00000363759 113 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 Y_RNA.251-201ENST00000364551 99 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 AC096949.1-201ENST00000412047 152 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 RNU7-79P-201ENST00000516082 62 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 RNU6-240P-201ENST00000516098 97 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 RNA5SP33-201ENST00000516687 98 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 RNU7-35P-201ENST00000517174 62 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
RFWD3Q6PCD5 RNU6-403P-201ENST00000363163 104 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 SNORD114-23-201ENST00000363536 72 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 RNU6-449P-201ENST00000383914 107 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.531-201ENST00000384589 121 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.580-201ENST00000391004 95 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.588-201ENST00000391254 102 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 AL603914.1-201ENST00000401964 204 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 AL512326.2-201ENST00000426359 151 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 AP003327.1-201ENST00000529684 127 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 MIR4491-201ENST00000581087 68 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 AC021443.1-201ENST00000604478 211 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 RNU6-309P-201ENST00000364573 106 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 RNU4-11P-201ENST00000365287 132 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 RNA5SP117-201ENST00000365294 118 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 RNU6-394P-201ENST00000410735 107 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.651-201ENST00000459380 103 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 RNU2-35P-201ENST00000516446 142 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.690-201ENST00000516603 95 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 RNU6-765P-201ENST00000516916 99 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 MIR6082-201ENST00000613604 109 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.778-201ENST00000620203 90 ntBASIC0.45□□□□□ -2.34
RFWD3Q6PCD5 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 RNU6-151P-201ENST00000364158 107 ntBASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 RNU7-164P-201ENST00000459221 62 ntBASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.686-201ENST00000516548 134 ntBASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 FTX_2.1-201ENST00000618816 94 ntBASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 AC010487.4-201ENST00000637027 61 ntBASIC0.44□□□□□ -2.34
RFWD3Q6PCD5 AL589743.1-201ENST00000551932 2712 ntBASIC0.43□□□□□ -2.34
RFWD3Q6PCD5 SNORA32-201ENST00000384072 121 ntBASIC0.43□□□□□ -2.34
RFWD3Q6PCD5 RNU6-794P-201ENST00000517261 64 ntBASIC0.43□□□□□ -2.34
RFWD3Q6PCD5 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.43□□□□□ -2.34
RFWD3Q6PCD5 MIR548AE2-201ENST00000583456 67 ntBASIC0.43□□□□□ -2.34
RFWD3Q6PCD5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 RNU6-508P-201ENST00000363231 103 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.270-201ENST00000364693 104 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.299-201ENST00000364973 94 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 RNU6-1130P-201ENST00000365434 107 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 SNORA72.6-201ENST00000384520 129 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 RNU7-197P-201ENST00000458836 62 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 AC090425.1-201ENST00000610007 140 ntBASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.366-201ENST00000365540 102 ntBASIC0.41□□□□□ -2.34
RFWD3Q6PCD5 SNORD116-18-201ENST00000383961 92 ntBASIC0.41□□□□□ -2.34
RFWD3Q6PCD5 MIR513C-201ENST00000401352 84 ntBASIC0.41□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
RFWD3Q6PCD5 RNU7-123P-201ENST00000515911 60 ntBASIC0.41□□□□□ -2.34
RFWD3Q6PCD5 MIR3144-201ENST00000579460 79 ntBASIC0.41□□□□□ -2.34
RFWD3Q6PCD5 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
RFWD3Q6PCD5 Y_RNA.298-201ENST00000364960 107 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 RNU6-886P-201ENST00000384319 105 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 RNU6-679P-201ENST00000391003 106 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 PCNPP3-201ENST00000393579 471 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 RNU7-137P-201ENST00000516788 62 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 MIR3678-201ENST00000578455 94 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 AL137067.1-201ENST00000615933 120 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 AC092634.7-201ENST00000621022 103 ntBASIC0.4□□□□□ -2.35
RFWD3Q6PCD5 SNORD114-10-201ENST00000363409 72 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.150-201ENST00000363562 102 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 RNU6-804P-201ENST00000384286 107 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 RNU6-460P-201ENST00000391158 108 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 RNU4-69P-201ENST00000410677 143 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 RNU5E-3P-201ENST00000515913 68 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 RNU6-1194P-201ENST00000516208 104 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms