Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU1-119P-201ENST00000391122 165 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 MIR513C-201ENST00000401352 84 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 RNU7-113P-201ENST00000459273 62 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 MTND5P41-201ENST00000517498 206 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 MIR3121-201ENST00000579680 77 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 RN7SL793P-201ENST00000583259 296 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 AC021443.1-201ENST00000604478 211 ntBASIC0.52□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.170-201ENST00000363746 110 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.215-201ENST00000364204 112 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 RNY1P4-201ENST00000384595 115 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 MIR569-201ENST00000385228 96 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 RNU6-460P-201ENST00000391158 108 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.588-201ENST00000391254 102 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 RNU7-200P-201ENST00000516105 62 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 AC090897.1-201ENST00000580909 226 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 MIR8066-201ENST00000617280 78 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 AC021753.1-201ENST00000635724 168 ntBASIC0.51□□□□□ -2.33
ZNF544Q6NX49 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.42-201ENST00000362660 108 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 RNU6-915P-201ENST00000364943 103 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.298-201ENST00000364960 107 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.299-201ENST00000364973 94 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.366-201ENST00000365540 102 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 RNY1P5-201ENST00000383890 115 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 MIR7-2-201ENST00000384970 110 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 MIR520H-201ENST00000385126 88 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 SNORD100-201ENST00000408573 76 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 AL512326.2-201ENST00000426359 151 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 RNU7-102P-201ENST00000458948 62 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 COX6CP6-201ENST00000490840 228 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 RNU7-123P-201ENST00000515911 60 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
ZNF544Q6NX49 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.8-201ENST00000362353 102 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU4-45P-201ENST00000365469 141 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 MIR936-201ENST00000401264 98 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-447P-201ENST00000410293 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-1118P-201ENST00000410382 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-1076P-201ENST00000410397 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-355P-201ENST00000410427 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-791P-201ENST00000410467 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-705P-201ENST00000410601 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-1100P-201ENST00000410691 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-860P-201ENST00000410860 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-1217P-201ENST00000411276 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU6-785P-201ENST00000411324 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU7-164P-201ENST00000459221 62 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU7-79P-201ENST00000516082 62 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 SNORA25.12-201ENST00000516202 82 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.692-201ENST00000516627 105 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNA5SP33-201ENST00000516687 98 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 RNU7-156P-201ENST00000517214 74 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 AP003327.1-201ENST00000529684 127 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 MIR548AE2-201ENST00000583456 67 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 AC008608.1-201ENST00000603910 127 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 AC108081.1-201ENST00000604358 221 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 U6.90-201ENST00000614007 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 AL137067.1-201ENST00000615933 120 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 U6.70-201ENST00000620287 104 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
ZNF544Q6NX49 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
ZNF544Q6NX49 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.420-201ENST00000384043 110 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 RNU6-364P-201ENST00000384387 107 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 SNORD93-201ENST00000408813 74 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 MIR1270-201ENST00000459320 83 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 RNU6-255P-201ENST00000516957 105 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 AP001328.1-201ENST00000528550 176 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 U7.2-201ENST00000607576 63 ntBASIC0.48□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.488-201ENST00000384403 102 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 Y_RNA.506-201ENST00000384494 102 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 RNU4-83P-201ENST00000410863 133 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 AC002350.1-201ENST00000490759 375 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 RNU6-1194P-201ENST00000516208 104 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 RNU6-448P-201ENST00000517052 107 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 MIR3612-201ENST00000579753 87 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 MIR4491-201ENST00000581087 68 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 MIR6082-201ENST00000613604 109 ntBASIC0.47□□□□□ -2.33
ZNF544Q6NX49 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
ZNF544Q6NX49 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 SNORD114-10-201ENST00000363409 72 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ZNF544Q6NX49 RNU4-69P-201ENST00000410677 143 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 RPL39P25-201ENST00000449384 154 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 RNY4P20-201ENST00000516678 93 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 RNU7-137P-201ENST00000516788 62 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 IGKV1-22-201ENST00000524313 326 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 AL589743.1-201ENST00000551932 2712 ntBASIC0.46□□□□□ -2.34
ZNF544Q6NX49 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms