Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR4491-201ENST00000581087 68 ntBASIC0.92□□□□□ -2.26
PPP4R4Q6NUP7 MIR489-201ENST00000384923 84 ntBASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 MT-TI-201ENST00000387365 69 ntBASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 RNU6-257P-201ENST00000410238 98 ntBASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 RNU4-83P-201ENST00000410863 133 ntBASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 COX6CP6-201ENST00000490840 228 ntBASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 RNU7-137P-201ENST00000516788 62 ntBASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
PPP4R4Q6NUP7 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-364P-201ENST00000384387 107 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 AL158147.1-201ENST00000443970 75 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 RN7SKP19-201ENST00000516016 252 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 SNORD67.1-201ENST00000516618 108 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.9□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-1062P-201ENST00000383908 107 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-447P-201ENST00000410293 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-355P-201ENST00000410427 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-791P-201ENST00000410467 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-705P-201ENST00000410601 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU4-69P-201ENST00000410677 143 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-860P-201ENST00000410860 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-785P-201ENST00000411324 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 U6.90-201ENST00000614007 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 U6.70-201ENST00000620287 104 ntBASIC0.89□□□□□ -2.27
PPP4R4Q6NUP7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 HSBP1P2-201ENST00000299671 229 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-647P-201ENST00000364243 107 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 SNORD100-201ENST00000408573 76 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-781P-201ENST00000516377 101 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 MIR3612-201ENST00000579753 87 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 MIR6082-201ENST00000613604 109 ntBASIC0.88□□□□□ -2.27
PPP4R4Q6NUP7 MIR613-201ENST00000385248 95 ntBASIC0.87□□□□□ -2.27
PPP4R4Q6NUP7 RPL39P25-201ENST00000449384 154 ntBASIC0.87□□□□□ -2.27
PPP4R4Q6NUP7 SNORA25.16-201ENST00000516741 121 ntBASIC0.87□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
PPP4R4Q6NUP7 MIR151B-201ENST00000584249 96 ntBASIC0.87□□□□□ -2.27
PPP4R4Q6NUP7 Y_RNA.343-201ENST00000365354 112 ntBASIC0.86□□□□□ -2.27
PPP4R4Q6NUP7 Y_RNA.466-201ENST00000384294 113 ntBASIC0.86□□□□□ -2.27
PPP4R4Q6NUP7 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
PPP4R4Q6NUP7 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
PPP4R4Q6NUP7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
PPP4R4Q6NUP7 MIR3133-201ENST00000583157 78 ntBASIC0.86□□□□□ -2.27
PPP4R4Q6NUP7 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
PPP4R4Q6NUP7 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-774P-201ENST00000363238 107 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 Y_RNA.299-201ENST00000364973 94 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 MIRLET7F2-201ENST00000385277 83 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-1307P-201ENST00000391012 103 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 RPS29P1-201ENST00000465274 159 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 AC002350.1-201ENST00000490759 375 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-403P-201ENST00000363163 104 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 SNORA40-201ENST00000388090 126 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 Y_RNA.586-201ENST00000391146 98 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 Y_RNA.703-201ENST00000516846 111 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-765P-201ENST00000516916 99 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-448P-201ENST00000517052 107 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 AC138749.4-201ENST00000563970 127 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 TUG1_4.1-201ENST00000619464 181 ntBASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.84□□□□□ -2.27
PPP4R4Q6NUP7 RNU6-235P-201ENST00000362644 107 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 SNORD114-10-201ENST00000363409 72 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 AP003327.1-201ENST00000529684 127 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 AC105081.1-201ENST00000617727 106 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 AC087741.2-201ENST00000619415 172 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 MIR6515-201ENST00000619843 57 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
PPP4R4Q6NUP7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-746P-201ENST00000384112 109 ntBASIC0.82□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-735P-201ENST00000410612 107 ntBASIC0.82□□□□□ -2.28
PPP4R4Q6NUP7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.82□□□□□ -2.28
PPP4R4Q6NUP7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.82□□□□□ -2.28
PPP4R4Q6NUP7 AC022709.1-201ENST00000615967 87 ntBASIC0.82□□□□□ -2.28
PPP4R4Q6NUP7 RNA5SP133-201ENST00000363368 119 ntBASIC0.81□□□□□ -2.28
PPP4R4Q6NUP7 SNORA72.6-201ENST00000384520 129 ntBASIC0.81□□□□□ -2.28
PPP4R4Q6NUP7 MIR206-201ENST00000384872 86 ntBASIC0.81□□□□□ -2.28
PPP4R4Q6NUP7 MIR548J-201ENST00000408833 112 ntBASIC0.81□□□□□ -2.28
PPP4R4Q6NUP7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.81□□□□□ -2.28
PPP4R4Q6NUP7 U6.109-201ENST00000636749 87 ntBASIC0.81□□□□□ -2.28
PPP4R4Q6NUP7 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 Y_RNA.198-201ENST00000364013 98 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 SNORD58C-201ENST00000365223 64 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-187P-201ENST00000384139 106 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-616P-201ENST00000384353 107 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms