Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 Y_RNA.515-201ENST00000384535 112 ntBASIC0.31□□□□□ -2.36
SNRNP48Q6IEG0 MIR644A-201ENST00000385262 94 ntBASIC0.31□□□□□ -2.36
SNRNP48Q6IEG0 RNU5E-9P-201ENST00000411164 104 ntBASIC0.31□□□□□ -2.36
SNRNP48Q6IEG0 MTND3P2-201ENST00000438452 342 ntBASIC0.31□□□□□ -2.36
SNRNP48Q6IEG0 uc_338.16-201ENST00000621804 95 ntBASIC0.31□□□□□ -2.36
SNRNP48Q6IEG0 Y_RNA.307-201ENST00000365022 117 ntBASIC0.3□□□□□ -2.36
SNRNP48Q6IEG0 RNY1P6-201ENST00000384193 109 ntBASIC0.3□□□□□ -2.36
SNRNP48Q6IEG0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.3□□□□□ -2.36
SNRNP48Q6IEG0 SNORD71-201ENST00000411292 86 ntBASIC0.3□□□□□ -2.36
SNRNP48Q6IEG0 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
SNRNP48Q6IEG0 MIR4305-201ENST00000583252 102 ntBASIC0.3□□□□□ -2.36
SNRNP48Q6IEG0 SNORA25.18-201ENST00000607153 114 ntBASIC0.3□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-349P-201ENST00000362402 107 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 Y_RNA.52-201ENST00000362760 96 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 SNORA36.1-201ENST00000363424 132 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-702P-201ENST00000364982 107 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-47P-201ENST00000383866 107 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 SNORA8.2-201ENST00000384372 139 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 SNORA72.6-201ENST00000384520 129 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 RNA5SP144-201ENST00000410846 116 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 MIR4431-201ENST00000579990 94 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-1082P-201ENST00000364574 107 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-574P-201ENST00000384265 107 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-196P-201ENST00000384315 107 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 Y_RNA.549-201ENST00000384657 102 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-768P-201ENST00000384683 107 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-1086P-201ENST00000410930 100 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 RNU7-79P-201ENST00000516082 62 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 RNU6-765P-201ENST00000516916 99 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
SNRNP48Q6IEG0 MIR411-201ENST00000362239 96 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.83-201ENST00000363005 113 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.193-201ENST00000363979 102 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.200-201ENST00000364018 102 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 SNORA2A-201ENST00000383885 135 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.435-201ENST00000384095 112 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.470-201ENST00000384307 117 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 AL512326.2-201ENST00000426359 151 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-469P-201ENST00000516253 101 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 SNORA31.14-201ENST00000516728 116 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 SNORA25.16-201ENST00000516741 121 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.27□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.452-201ENST00000384202 108 ntBASIC0.26□□□□□ -2.37
SNRNP48Q6IEG0 RNU7-113P-201ENST00000459273 62 ntBASIC0.26□□□□□ -2.37
SNRNP48Q6IEG0 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
SNRNP48Q6IEG0 RNA5SP236-201ENST00000516169 116 ntBASIC0.26□□□□□ -2.37
SNRNP48Q6IEG0 MTND5P34-201ENST00000568888 325 ntBASIC0.26□□□□□ -2.37
SNRNP48Q6IEG0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.26□□□□□ -2.37
SNRNP48Q6IEG0 RNY4P3-201ENST00000365254 95 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-291P-201ENST00000384720 107 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 AL022718.1-201ENST00000412004 84 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 snoU13.19-201ENST00000459148 104 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 RNU7-35P-201ENST00000517174 62 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 MIR3149-201ENST00000584629 83 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 MIR4719-201ENST00000585233 84 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 AC078938.1-201ENST00000620993 318 ntBASIC0.25□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.120-201ENST00000363304 110 ntBASIC0.24□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-1020P-201ENST00000363684 107 ntBASIC0.24□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.24□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-1219P-201ENST00000516143 112 ntBASIC0.24□□□□□ -2.37
SNRNP48Q6IEG0 RNA5SP33-201ENST00000516687 98 ntBASIC0.24□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.697-201ENST00000516776 113 ntBASIC0.24□□□□□ -2.37
SNRNP48Q6IEG0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
SNRNP48Q6IEG0 SNORD115-2-201ENST00000362842 82 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-312P-201ENST00000364629 107 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 SNORD115-20-201ENST00000365099 82 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 SNORA32-201ENST00000384072 121 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-535P-201ENST00000384722 107 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 AC107027.2-201ENST00000512197 115 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 RNA5SP268-201ENST00000516828 124 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 AC022559.1-201ENST00000520905 205 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 AC009779.6-201ENST00000603972 165 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 AC099654.10-201ENST00000640395 161 ntBASIC0.23□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-818P-201ENST00000364837 108 ntBASIC0.22□□□□□ -2.37
SNRNP48Q6IEG0 RNU6-690P-201ENST00000365242 106 ntBASIC0.22□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.337-201ENST00000365312 102 ntBASIC0.22□□□□□ -2.37
SNRNP48Q6IEG0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.22□□□□□ -2.37
SNRNP48Q6IEG0 AC130289.1-201ENST00000577321 73 ntBASIC0.22□□□□□ -2.37
SNRNP48Q6IEG0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.21□□□□□ -2.38
SNRNP48Q6IEG0 Y_RNA.233-201ENST00000364407 101 ntBASIC0.21□□□□□ -2.38
SNRNP48Q6IEG0 RNU6-463P-201ENST00000384340 107 ntBASIC0.21□□□□□ -2.38
SNRNP48Q6IEG0 RNU6-30P-201ENST00000384561 107 ntBASIC0.21□□□□□ -2.38
SNRNP48Q6IEG0 SUMO1P3-201ENST00000439961 304 ntBASIC0.21□□□□□ -2.38
SNRNP48Q6IEG0 RNU6-531P-201ENST00000516694 104 ntBASIC0.21□□□□□ -2.38
SNRNP48Q6IEG0 DEFB131E-201ENST00000532329 154 ntBASIC0.21□□□□□ -2.38
SNRNP48Q6IEG0 RNA5SP133-201ENST00000363368 119 ntBASIC0.2□□□□□ -2.38
SNRNP48Q6IEG0 Y_RNA.497-201ENST00000384447 98 ntBASIC0.2□□□□□ -2.38
SNRNP48Q6IEG0 Y_RNA.531-201ENST00000384589 121 ntBASIC0.2□□□□□ -2.38
SNRNP48Q6IEG0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SNRNP48Q6IEG0 SNORA75.5-201ENST00000391291 81 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms