Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 AL162726.3-218ENST00000636401 95 ntBASIC1.3□□□□□ -2.2
VPS53Q5VIR6 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 Y_RNA.309-201ENST00000365046 111 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 MT-TF-201ENST00000387314 71 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 RNU7-90P-201ENST00000459216 62 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS53Q5VIR6 SNORD114-21-201ENST00000606412 72 ntBASIC1.29□□□□□ -2.2
VPS53Q5VIR6 MIR30D-201ENST00000362283 70 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 SNORA63.5-201ENST00000363548 123 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 RNY1P13-201ENST00000365030 105 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 Y_RNA.323-201ENST00000365157 109 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 RNU6-949P-201ENST00000384040 107 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 RNU6-616P-201ENST00000384353 107 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 RNA5SP95-201ENST00000410319 137 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 MIR1912-201ENST00000410389 80 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 MIR18B-201ENST00000454574 71 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 Y_RNA.773-201ENST00000607168 90 ntBASIC1.28□□□□□ -2.2
VPS53Q5VIR6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
VPS53Q5VIR6 RNU6-363P-201ENST00000362895 105 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 SNORD114-10-201ENST00000363409 72 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 RNU6-755P-201ENST00000364400 103 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 RNU6-1107P-201ENST00000364817 104 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 SNORA2B-201ENST00000384583 137 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 AC068339.1-201ENST00000526965 141 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 SNORA4-201ENST00000584302 138 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 RNU6-94P-201ENST00000607728 107 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 MIR1255B1-201ENST00000636325 63 ntBASIC1.27□□□□□ -2.21
VPS53Q5VIR6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VPS53Q5VIR6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
VPS53Q5VIR6 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
VPS53Q5VIR6 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
VPS53Q5VIR6 Y_RNA.507-201ENST00000384500 99 ntBASIC1.26□□□□□ -2.21
VPS53Q5VIR6 RNU6-816P-201ENST00000390914 107 ntBASIC1.26□□□□□ -2.21
VPS53Q5VIR6 RNU6-1268P-201ENST00000391214 107 ntBASIC1.26□□□□□ -2.21
VPS53Q5VIR6 RNU6-1239P-201ENST00000391310 107 ntBASIC1.26□□□□□ -2.21
VPS53Q5VIR6 RNU7-137P-201ENST00000516788 62 ntBASIC1.26□□□□□ -2.21
VPS53Q5VIR6 Y_RNA.81-201ENST00000362997 102 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU4-67P-201ENST00000364569 141 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 U8.6-201ENST00000364939 135 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 SNORD115-35-201ENST00000365122 82 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-44P-201ENST00000384045 107 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 MIR206-201ENST00000384872 86 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-447P-201ENST00000410293 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-1118P-201ENST00000410382 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-1076P-201ENST00000410397 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-355P-201ENST00000410427 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-791P-201ENST00000410467 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-705P-201ENST00000410601 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-1100P-201ENST00000410691 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-860P-201ENST00000410860 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-1217P-201ENST00000411276 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-785P-201ENST00000411324 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU7-2P-201ENST00000516096 62 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 SNORD67.1-201ENST00000516618 108 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 MIR5009-201ENST00000578736 100 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS53Q5VIR6 U6.90-201ENST00000614007 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 U6.70-201ENST00000620287 104 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
VPS53Q5VIR6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.24□□□□□ -2.21
VPS53Q5VIR6 RNU6-409P-201ENST00000384114 104 ntBASIC1.24□□□□□ -2.21
VPS53Q5VIR6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.24□□□□□ -2.21
VPS53Q5VIR6 uc_338.6-201ENST00000613544 171 ntBASIC1.24□□□□□ -2.21
VPS53Q5VIR6 SNORA22-201ENST00000383907 134 ntBASIC1.23□□□□□ -2.21
VPS53Q5VIR6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.23□□□□□ -2.21
VPS53Q5VIR6 RPL39P25-201ENST00000449384 154 ntBASIC1.23□□□□□ -2.21
VPS53Q5VIR6 RNU6-521P-201ENST00000516663 105 ntBASIC1.23□□□□□ -2.21
VPS53Q5VIR6 AC008163.1-202ENST00000636004 2889 ntBASIC1.22□□□□□ -2.21
VPS53Q5VIR6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS53Q5VIR6 RNU6-1018P-201ENST00000516577 106 ntBASIC1.22□□□□□ -2.21
VPS53Q5VIR6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.22□□□□□ -2.21
VPS53Q5VIR6 MIR8070-201ENST00000616510 88 ntBASIC1.22□□□□□ -2.21
VPS53Q5VIR6 AL391516.1-201ENST00000554380 2449 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.155-201ENST00000363632 101 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 RNU4-38P-201ENST00000364472 129 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 SNORA25.9-201ENST00000365087 128 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 U8.15-201ENST00000390947 134 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 RNU6-733P-201ENST00000410759 104 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 AC002429.1-201ENST00000437672 148 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 RNA5SP102-201ENST00000516865 106 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 AC023827.1-201ENST00000569247 97 ntBASIC1.21□□□□□ -2.22
VPS53Q5VIR6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS53Q5VIR6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.116-201ENST00000363292 103 ntBASIC1.2□□□□□ -2.22
VPS53Q5VIR6 Y_RNA.163-201ENST00000363702 113 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms