Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC018659.1-201ENST00000551083 169 ntBASIC0.7□□□□□ -2.3
CCDC38Q502W7 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
CCDC38Q502W7 MIR4491-201ENST00000581087 68 ntBASIC0.7□□□□□ -2.3
CCDC38Q502W7 AC090425.1-201ENST00000610007 140 ntBASIC0.7□□□□□ -2.3
CCDC38Q502W7 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
CCDC38Q502W7 RNU6-403P-201ENST00000363163 104 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 RNU6-309P-201ENST00000364573 106 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 Y_RNA.270-201ENST00000364693 104 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 AC096949.1-201ENST00000412047 152 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 RNA5SP436-201ENST00000516020 115 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 AP003327.1-201ENST00000529684 127 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 MIR6082-201ENST00000613604 109 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC38Q502W7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.69□□□□□ -2.3
CCDC38Q502W7 RNA5SP117-201ENST00000365294 118 ntBASIC0.68□□□□□ -2.3
CCDC38Q502W7 RNU7-164P-201ENST00000459221 62 ntBASIC0.68□□□□□ -2.3
CCDC38Q502W7 RNU6-765P-201ENST00000516916 99 ntBASIC0.68□□□□□ -2.3
CCDC38Q502W7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 RNU6-1130P-201ENST00000365434 107 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 SNORD116-18-201ENST00000383961 92 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 RNY1P8-201ENST00000383970 114 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 RNU7-197P-201ENST00000458836 62 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.67□□□□□ -2.3
CCDC38Q502W7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 RNU6-508P-201ENST00000363231 103 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 RNU6-945P-201ENST00000383947 107 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 SNORA32-201ENST00000384072 121 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 RNU6-886P-201ENST00000384319 105 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 MIR513C-201ENST00000401352 84 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC38Q502W7 MIR548AE2-201ENST00000583456 67 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 AL589743.1-201ENST00000551932 2712 ntBASIC0.66□□□□□ -2.3
CCDC38Q502W7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC38Q502W7 Y_RNA.299-201ENST00000364973 94 ntBASIC0.65□□□□□ -2.31
CCDC38Q502W7 PCNPP3-201ENST00000393579 471 ntBASIC0.65□□□□□ -2.31
CCDC38Q502W7 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
CCDC38Q502W7 RNU7-123P-201ENST00000515911 60 ntBASIC0.65□□□□□ -2.31
CCDC38Q502W7 MIR3144-201ENST00000579460 79 ntBASIC0.65□□□□□ -2.31
CCDC38Q502W7 AC098479.1-201ENST00000609225 154 ntBASIC0.65□□□□□ -2.31
CCDC38Q502W7 Y_RNA.150-201ENST00000363562 102 ntBASIC0.64□□□□□ -2.31
CCDC38Q502W7 Y_RNA.298-201ENST00000364960 107 ntBASIC0.64□□□□□ -2.31
CCDC38Q502W7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.64□□□□□ -2.31
CCDC38Q502W7 SNORA72.6-201ENST00000384520 129 ntBASIC0.64□□□□□ -2.31
CCDC38Q502W7 MIR7-2-201ENST00000384970 110 ntBASIC0.64□□□□□ -2.31
CCDC38Q502W7 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
CCDC38Q502W7 RNU6-804P-201ENST00000384286 107 ntBASIC0.63□□□□□ -2.31
CCDC38Q502W7 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
CCDC38Q502W7 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
CCDC38Q502W7 RNU4-69P-201ENST00000410677 143 ntBASIC0.62□□□□□ -2.31
CCDC38Q502W7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.62□□□□□ -2.31
CCDC38Q502W7 RNU5E-3P-201ENST00000515913 68 ntBASIC0.62□□□□□ -2.31
CCDC38Q502W7 Y_RNA.692-201ENST00000516627 105 ntBASIC0.62□□□□□ -2.31
CCDC38Q502W7 MIR548X2-201ENST00000579776 100 ntBASIC0.62□□□□□ -2.31
CCDC38Q502W7 AL137067.1-201ENST00000615933 120 ntBASIC0.62□□□□□ -2.31
CCDC38Q502W7 Y_RNA.8-201ENST00000362353 102 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 SNORD114-10-201ENST00000363409 72 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 RNU6-915P-201ENST00000364943 103 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 Y_RNA.555-201ENST00000384673 110 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 RNU6-460P-201ENST00000391158 108 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 AC108059.2-201ENST00000434626 151 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 RNU7-137P-201ENST00000516788 62 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 MIR3678-201ENST00000578455 94 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 MIR3121-201ENST00000579680 77 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
CCDC38Q502W7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC38Q502W7 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 Y_RNA.398-201ENST00000383952 99 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 Y_RNA.400-201ENST00000383963 111 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 RNU6-679P-201ENST00000391003 106 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 SNORD67.1-201ENST00000516618 108 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 SNORA25.16-201ENST00000516741 121 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 MIR3671-201ENST00000580455 88 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 AC092634.7-201ENST00000621022 103 ntBASIC0.6□□□□□ -2.31
CCDC38Q502W7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC38Q502W7 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
CCDC38Q502W7 SNORA25.12-201ENST00000516202 82 ntBASIC0.59□□□□□ -2.31
CCDC38Q502W7 AC108081.1-201ENST00000604358 221 ntBASIC0.59□□□□□ -2.31
CCDC38Q502W7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.59□□□□□ -2.31
CCDC38Q502W7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
CCDC38Q502W7 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.31
CCDC38Q502W7 AP001340.1-201ENST00000624405 217 ntBASIC0.59□□□□□ -2.31
CCDC38Q502W7 RNU4-58P-201ENST00000363192 141 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 RNA5SP133-201ENST00000363368 119 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 RNU6-469P-201ENST00000516253 101 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 RNY4P20-201ENST00000516678 93 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.58□□□□□ -2.32
CCDC38Q502W7 RNA5SP94-201ENST00000516917 108 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 297.9 ms