Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 Y_RNA.396-201ENST00000383949 103 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 RNU6-493P-201ENST00000391321 108 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 RNA5SP266-201ENST00000410273 108 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 MTND1P19-201ENST00000511780 315 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 RNA5SP227-201ENST00000516184 113 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 SCARNA15-202ENST00000516881 127 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 AC011921.3-201ENST00000605540 361 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.145-201ENST00000363527 102 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.288-201ENST00000364854 92 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 RNY1P13-201ENST00000365030 105 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 RNU6-643P-201ENST00000384018 107 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.539-201ENST00000384635 107 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 MIR606-201ENST00000384851 96 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 MIR548F4-201ENST00000408515 105 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 snoU13.11-201ENST00000459219 104 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 RNY3P16-201ENST00000516338 101 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 DEFB131E-201ENST00000532329 154 ntBASIC0.09□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.149-201ENST00000363558 117 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 RNY1P6-201ENST00000384193 109 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 RNU6-291P-201ENST00000384720 107 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 RNU2-38P-201ENST00000410856 79 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 SUMO1P3-201ENST00000439961 304 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 AL117187.1-201ENST00000555482 181 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.757-201ENST00000578934 114 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 MIR4723-201ENST00000585070 81 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 AC008737.2-201ENST00000599446 118 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 AC091304.10-201ENST00000641554 121 ntBASIC0.08□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.47-201ENST00000362697 108 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.182-201ENST00000363880 111 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.326-201ENST00000365176 113 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 AC096949.1-201ENST00000412047 152 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 RNU7-79P-201ENST00000516082 62 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 SNORA25.16-201ENST00000516741 121 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 MIR4639-201ENST00000584938 69 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 MIR7107-201ENST00000611489 80 ntBASIC0.07□□□□□ -2.4
LRIT3Q3SXY7 RNY4P28-201ENST00000365281 93 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 SNORD127-201ENST00000458892 86 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 RNU7-113P-201ENST00000459273 62 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.700-201ENST00000516806 100 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 RNA5SP47-201ENST00000517230 109 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 MTND5P34-201ENST00000568888 325 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.812-201ENST00000610788 101 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.784-201ENST00000613803 101 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.787-201ENST00000616522 101 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.780-201ENST00000617336 101 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.801-201ENST00000619005 101 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 MIR6828-201ENST00000636181 60 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 MTND5P32-201ENST00000560711 1802 ntBASIC0.06□□□□□ -2.4
LRIT3Q3SXY7 RNU4-58P-201ENST00000363192 141 ntBASIC0.05□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.457-201ENST00000384237 111 ntBASIC0.05□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.459-201ENST00000384251 102 ntBASIC0.05□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.521-201ENST00000384560 114 ntBASIC0.05□□□□□ -2.4
LRIT3Q3SXY7 SNORD28-201ENST00000384706 75 ntBASIC0.05□□□□□ -2.4
LRIT3Q3SXY7 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
LRIT3Q3SXY7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.171-201ENST00000363760 102 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 SNORD27-201ENST00000363981 72 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 RNU6V-201ENST00000384105 107 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 MIRLET7F2-201ENST00000385277 83 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 RNA5SP144-201ENST00000410846 116 ntBASIC0.04□□□□□ -2.4
LRIT3Q3SXY7 MIR101-1-201ENST00000362265 75 ntBASIC0.03□□□□□ -2.4
LRIT3Q3SXY7 RNU6-275P-201ENST00000364910 107 ntBASIC0.03□□□□□ -2.4
LRIT3Q3SXY7 Y_RNA.556-201ENST00000384677 113 ntBASIC0.03□□□□□ -2.4
LRIT3Q3SXY7 RNA5SP33-201ENST00000516687 98 ntBASIC0.03□□□□□ -2.4
LRIT3Q3SXY7 RNU6-1258P-201ENST00000516911 111 ntBASIC0.03□□□□□ -2.4
LRIT3Q3SXY7 RNU7-35P-201ENST00000517174 62 ntBASIC0.03□□□□□ -2.4
LRIT3Q3SXY7 AC244669.1-204ENST00000621564 178 ntBASIC0.03□□□□□ -2.4
LRIT3Q3SXY7 MIR101-2-201ENST00000362195 79 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 RNA5SP133-201ENST00000363368 119 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 Y_RNA.626-201ENST00000411288 95 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 MTND2P23-201ENST00000422990 651 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 RNU6-848P-201ENST00000515948 107 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 RNU6-617P-201ENST00000516147 107 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 RNU6-473P-201ENST00000516164 107 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 RNU6-531P-201ENST00000516694 104 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 MIR4645-201ENST00000583158 77 ntBASIC0.02□□□□□ -2.41
LRIT3Q3SXY7 MIR411-201ENST00000362239 96 ntBASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 Y_RNA.562-201ENST00000384695 113 ntBASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 MIR1302-3-201ENST00000408128 138 ntBASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 MRPS18CP4-201ENST00000535821 231 ntBASIC0.01□□□□□ -2.41
LRIT3Q3SXY7 RNU6-1126P-201ENST00000384002 107 ntBASIC0□□□□□ -2.41
LRIT3Q3SXY7 Y_RNA.470-201ENST00000384307 117 ntBASIC0□□□□□ -2.41
LRIT3Q3SXY7 RPS29P8-201ENST00000445109 171 ntBASIC0□□□□□ -2.41
LRIT3Q3SXY7 MIR4308-201ENST00000580634 81 ntBASIC0□□□□□ -2.41
LRIT3Q3SXY7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms