Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU6-355P-201ENST00000410427 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-791P-201ENST00000410467 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-705P-201ENST00000410601 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-1100P-201ENST00000410691 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-860P-201ENST00000410860 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-1217P-201ENST00000411276 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-785P-201ENST00000411324 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 COX6CP6-201ENST00000490840 228 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 U6.90-201ENST00000614007 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 U6.70-201ENST00000620287 104 ntBASIC1.24□□□□□ -2.21
CCDC144BQ3MJ40 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.23□□□□□ -2.21
CCDC144BQ3MJ40 Y_RNA.198-201ENST00000364013 98 ntBASIC1.23□□□□□ -2.21
CCDC144BQ3MJ40 RNU1-119P-201ENST00000391122 165 ntBASIC1.23□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-1223P-201ENST00000517124 104 ntBASIC1.23□□□□□ -2.21
CCDC144BQ3MJ40 IGKV1-22-201ENST00000524313 326 ntBASIC1.23□□□□□ -2.21
CCDC144BQ3MJ40 MIR151B-201ENST00000584249 96 ntBASIC1.23□□□□□ -2.21
CCDC144BQ3MJ40 MIR6515-201ENST00000619843 57 ntBASIC1.23□□□□□ -2.21
CCDC144BQ3MJ40 U8.15-201ENST00000390947 134 ntBASIC1.22□□□□□ -2.21
CCDC144BQ3MJ40 MIR1263-201ENST00000408324 86 ntBASIC1.22□□□□□ -2.21
CCDC144BQ3MJ40 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC144BQ3MJ40 RNU7-156P-201ENST00000517214 74 ntBASIC1.22□□□□□ -2.21
CCDC144BQ3MJ40 MIR3163-201ENST00000581592 73 ntBASIC1.22□□□□□ -2.21
CCDC144BQ3MJ40 RNU6-235P-201ENST00000362644 107 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 SNORD114-10-201ENST00000363409 72 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 RNU6-187P-201ENST00000384139 106 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 RNU6-80P-201ENST00000384195 107 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 AL603908.1-201ENST00000406098 201 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 TMSB4XP3-201ENST00000445144 114 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 RNU7-56P-201ENST00000458744 62 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 RNU6-1061P-201ENST00000516530 99 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 SNORD92-201ENST00000585078 85 ntBASIC1.21□□□□□ -2.22
CCDC144BQ3MJ40 Y_RNA.528-201ENST00000384575 108 ntBASIC1.2□□□□□ -2.22
CCDC144BQ3MJ40 RNU4-83P-201ENST00000410863 133 ntBASIC1.2□□□□□ -2.22
CCDC144BQ3MJ40 RNU6-971P-201ENST00000516920 106 ntBASIC1.2□□□□□ -2.22
CCDC144BQ3MJ40 FAM71BP1-201ENST00000604431 523 ntBASIC1.2□□□□□ -2.22
CCDC144BQ3MJ40 Y_RNA.346-201ENST00000365385 112 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 AC015818.7-201ENST00000428754 109 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 AC087499.7-201ENST00000441958 109 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 AC022523.2-201ENST00000561045 150 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 AL353765.1-201ENST00000605514 183 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 AC025166.1-201ENST00000612411 163 ntBASIC1.19□□□□□ -2.22
CCDC144BQ3MJ40 MIR373-201ENST00000362273 69 ntBASIC1.18□□□□□ -2.22
CCDC144BQ3MJ40 RNU6-1104P-201ENST00000384723 104 ntBASIC1.18□□□□□ -2.22
CCDC144BQ3MJ40 MIR608-201ENST00000384820 100 ntBASIC1.18□□□□□ -2.22
CCDC144BQ3MJ40 MIR520H-201ENST00000385126 88 ntBASIC1.18□□□□□ -2.22
CCDC144BQ3MJ40 SNORD58C-201ENST00000365223 64 ntBASIC1.17□□□□□ -2.22
CCDC144BQ3MJ40 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC144BQ3MJ40 MIR7-2-201ENST00000384970 110 ntBASIC1.17□□□□□ -2.22
CCDC144BQ3MJ40 SUMO1P3-201ENST00000439961 304 ntBASIC1.17□□□□□ -2.22
CCDC144BQ3MJ40 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
CCDC144BQ3MJ40 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
CCDC144BQ3MJ40 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 SNORA22C-201ENST00000384614 134 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 SNORD99-201ENST00000408612 74 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 RNU6-781P-201ENST00000516377 101 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 SNORD67.1-201ENST00000516618 108 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 RNU7-137P-201ENST00000516788 62 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 RNA5SP480-201ENST00000516840 109 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 RNU7-6P-201ENST00000516845 62 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 AC133485.1-201ENST00000567176 124 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 PVT1_3.1-201ENST00000620853 95 ntBASIC1.16□□□□□ -2.22
CCDC144BQ3MJ40 RNU6-403P-201ENST00000363163 104 ntBASIC1.15□□□□□ -2.23
CCDC144BQ3MJ40 RNU6-1335P-201ENST00000365426 107 ntBASIC1.15□□□□□ -2.23
CCDC144BQ3MJ40 MIRLET7F2-201ENST00000385277 83 ntBASIC1.15□□□□□ -2.23
CCDC144BQ3MJ40 RNU7-102P-201ENST00000458948 62 ntBASIC1.15□□□□□ -2.23
CCDC144BQ3MJ40 RNU6-765P-201ENST00000516916 99 ntBASIC1.15□□□□□ -2.23
CCDC144BQ3MJ40 MIR4491-201ENST00000581087 68 ntBASIC1.15□□□□□ -2.23
CCDC144BQ3MJ40 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
CCDC144BQ3MJ40 RNU6-772P-201ENST00000516042 105 ntBASIC1.14□□□□□ -2.23
CCDC144BQ3MJ40 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 AL157777.2-201ENST00000258070 137 ntBASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 RNY4P6-201ENST00000363667 96 ntBASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 ACA64.5-201ENST00000516207 127 ntBASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 MIR3973-201ENST00000579824 107 ntBASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 AC090897.1-201ENST00000580909 226 ntBASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 MIR6082-201ENST00000613604 109 ntBASIC1.13□□□□□ -2.23
CCDC144BQ3MJ40 RNU4-45P-201ENST00000365469 141 ntBASIC1.12□□□□□ -2.23
CCDC144BQ3MJ40 RNU6-81P-201ENST00000365608 104 ntBASIC1.12□□□□□ -2.23
CCDC144BQ3MJ40 MIR598-201ENST00000384868 97 ntBASIC1.12□□□□□ -2.23
CCDC144BQ3MJ40 Y_RNA.588-201ENST00000391254 102 ntBASIC1.12□□□□□ -2.23
CCDC144BQ3MJ40 AP003327.1-201ENST00000529684 127 ntBASIC1.12□□□□□ -2.23
CCDC144BQ3MJ40 MIR8066-201ENST00000617280 78 ntBASIC1.12□□□□□ -2.23
CCDC144BQ3MJ40 MTND5P18-201ENST00000445624 1801 ntBASIC1.12□□□□□ -2.23
CCDC144BQ3MJ40 Y_RNA.71-201ENST00000362892 104 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 SNORD115-19-201ENST00000363098 82 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 SNORD115-18-201ENST00000363293 82 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 SNORD115-17-201ENST00000364612 82 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 SNORA72.6-201ENST00000384520 129 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 MIR573-201ENST00000384964 99 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 MIR1270-201ENST00000459320 83 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 RNA5SP436-201ENST00000516020 115 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 RNU6-1194P-201ENST00000516208 104 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 RNU6-448P-201ENST00000517052 107 ntBASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC144BQ3MJ40 AC011195.1-201ENST00000578177 177 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms