Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SF3B3Q15393 RNU6-1086P-201ENST00000410930 100 ntBASIC1.46□□□□□ -2.18
SF3B3Q15393 AL353813.1-201ENST00000440700 253 ntBASIC1.46□□□□□ -2.18
SF3B3Q15393 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
SF3B3Q15393 Y_RNA.78-201ENST00000362970 110 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU6-32P-201ENST00000383948 107 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU6-13P-201ENST00000384248 107 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 Y_RNA.495-201ENST00000384435 112 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU6-12P-201ENST00000384604 107 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU6-41P-201ENST00000384741 107 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNA5SP89-201ENST00000410300 108 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 snoU13.2-201ENST00000459201 104 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 snoU13.18-201ENST00000459483 104 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU7-79P-201ENST00000516082 62 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU6-168P-201ENST00000516189 101 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU11-2P-201ENST00000516898 142 ntBASIC1.45□□□□□ -2.18
SF3B3Q15393 RNU6-1113P-201ENST00000384348 107 ntBASIC1.44□□□□□ -2.18
SF3B3Q15393 MT-TN-201ENST00000387400 73 ntBASIC1.44□□□□□ -2.18
SF3B3Q15393 MIR2115-201ENST00000516657 100 ntBASIC1.44□□□□□ -2.18
SF3B3Q15393 RNU6-537P-201ENST00000517277 103 ntBASIC1.44□□□□□ -2.18
SF3B3Q15393 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.44□□□□□ -2.18
SF3B3Q15393 MIR4264-201ENST00000583520 66 ntBASIC1.44□□□□□ -2.18
SF3B3Q15393 MIR6516-201ENST00000630554 81 ntBASIC1.44□□□□□ -2.18
SF3B3Q15393 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SF3B3Q15393 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SF3B3Q15393 MIR103A2-201ENST00000362154 78 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 Y_RNA.155-201ENST00000363632 101 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 Y_RNA.360-201ENST00000365512 102 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-409P-201ENST00000384114 104 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-1237P-201ENST00000384777 107 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 MIR563-201ENST00000385080 79 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-679P-201ENST00000391003 106 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 SNORA19.1-201ENST00000410656 129 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-733P-201ENST00000410759 104 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-1054P-201ENST00000411293 104 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-904P-201ENST00000516206 101 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-521P-201ENST00000516663 105 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 AC019288.1-201ENST00000557918 224 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 AC141846.1-201ENST00000568348 142 ntBASIC1.43□□□□□ -2.18
SF3B3Q15393 RNU6-1099P-201ENST00000363533 107 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 SNORD114-27-201ENST00000363766 70 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 RNY1P13-201ENST00000365030 105 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 SNORD115-35-201ENST00000365122 82 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 MIR590-201ENST00000385008 97 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 MIR605-201ENST00000385078 83 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 MIR577-201ENST00000385196 96 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 RNU6-613P-201ENST00000410412 108 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.42□□□□□ -2.18
SF3B3Q15393 RNU7-2P-201ENST00000516096 62 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 SNORD67.1-201ENST00000516618 108 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 RMST_2.1-201ENST00000617263 136 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 AL662814.1-201ENST00000617364 121 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 MIR6740-201ENST00000618268 113 ntBASIC1.42□□□□□ -2.18
SF3B3Q15393 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SF3B3Q15393 MIR377-201ENST00000362145 69 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 RNU6-1298P-201ENST00000362456 101 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 MIR520E-201ENST00000384867 87 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 MIR206-201ENST00000384872 86 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 MIR588-201ENST00000384900 83 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 RNA5SP237-201ENST00000410414 113 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 SNORA7.5-201ENST00000410672 110 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 RNU6-1018P-201ENST00000516577 106 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 RNU7-137P-201ENST00000516788 62 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 MIR4694-201ENST00000578534 80 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 AP000753.3-201ENST00000604083 169 ntBASIC1.41□□□□□ -2.18
SF3B3Q15393 RNY3P2-201ENST00000362918 102 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 SNORD114-10-201ENST00000363409 72 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 RNU6-654P-201ENST00000364373 107 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 RNU6-205P-201ENST00000390858 107 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 RNU6-1307P-201ENST00000391012 103 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 AC048334.1-201ENST00000477975 159 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.4□□□□□ -2.19
SF3B3Q15393 AC141557.1-201ENST00000540982 400 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
SF3B3Q15393 RNU6-1313P-201ENST00000362622 102 ntBASIC1.39□□□□□ -2.19
SF3B3Q15393 RNU6-580P-201ENST00000365159 107 ntBASIC1.39□□□□□ -2.19
SF3B3Q15393 Y_RNA.348-201ENST00000365403 103 ntBASIC1.39□□□□□ -2.19
SF3B3Q15393 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
SF3B3Q15393 DEFB131E-201ENST00000532329 154 ntBASIC1.39□□□□□ -2.19
SF3B3Q15393 AP001318.4-201ENST00000616637 121 ntBASIC1.39□□□□□ -2.19
SF3B3Q15393 Y_RNA.818-201ENST00000618813 71 ntBASIC1.39□□□□□ -2.19
SF3B3Q15393 MIR30D-201ENST00000362283 70 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 RNU6-832P-201ENST00000363319 107 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 RNU4-36P-201ENST00000364294 144 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 Y_RNA.377-201ENST00000365644 108 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 RNU6-949P-201ENST00000384040 107 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 RNU6-1201P-201ENST00000384227 107 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 Y_RNA.544-201ENST00000384650 113 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 RNU7-62P-201ENST00000458856 62 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 AC087343.1-201ENST00000477341 475 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 RNU6-109P-201ENST00000516364 107 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 Y_RNA.677-201ENST00000516401 85 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 RNU6-184P-201ENST00000516514 107 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms