Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.48□□□□□ -2.17
SSRP1Q08945 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.48□□□□□ -2.17
SSRP1Q08945 AL589743.1-201ENST00000551932 2712 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 RNU6-429P-201ENST00000384582 108 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 MIR19B1-201ENST00000384829 87 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.47□□□□□ -2.17
SSRP1Q08945 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 RPL39P34-201ENST00000477141 156 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 RNU7-137P-201ENST00000516788 62 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
SSRP1Q08945 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SSRP1Q08945 Y_RNA.281-201ENST00000364774 94 ntBASIC1.46□□□□□ -2.18
SSRP1Q08945 RNU6-934P-201ENST00000365154 107 ntBASIC1.46□□□□□ -2.18
SSRP1Q08945 Y_RNA.549-201ENST00000384657 102 ntBASIC1.46□□□□□ -2.18
SSRP1Q08945 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
SSRP1Q08945 SNORD83.1-201ENST00000411362 77 ntBASIC1.46□□□□□ -2.18
SSRP1Q08945 RNU6-412P-201ENST00000516434 106 ntBASIC1.46□□□□□ -2.18
SSRP1Q08945 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SSRP1Q08945 SNORA63.5-201ENST00000363548 123 ntBASIC1.45□□□□□ -2.18
SSRP1Q08945 MIR206-201ENST00000384872 86 ntBASIC1.45□□□□□ -2.18
SSRP1Q08945 MIR1255B1-201ENST00000636325 63 ntBASIC1.45□□□□□ -2.18
SSRP1Q08945 AL162726.3-218ENST00000636401 95 ntBASIC1.45□□□□□ -2.18
SSRP1Q08945 Y_RNA.116-201ENST00000363292 103 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 RNU6-1325P-201ENST00000364905 105 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 Y_RNA.507-201ENST00000384500 99 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 U8.15-201ENST00000390947 134 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 MIR1276-201ENST00000408707 83 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 RNU7-2P-201ENST00000516096 62 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 MIR4771-2-201ENST00000577758 74 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 MIR4771-1-201ENST00000582617 74 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
SSRP1Q08945 AC023934.1-201ENST00000574529 2389 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SSRP1Q08945 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSRP1Q08945 Y_RNA.49-201ENST00000362714 112 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 Y_RNA.224-201ENST00000364308 111 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 Y_RNA.309-201ENST00000365046 111 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 SNORD115-35-201ENST00000365122 82 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 MIR518E-201ENST00000385252 88 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 MIR1257-201ENST00000408490 117 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-447P-201ENST00000410293 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-1118P-201ENST00000410382 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 MIR1912-201ENST00000410389 80 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-1076P-201ENST00000410397 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-355P-201ENST00000410427 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-791P-201ENST00000410467 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-705P-201ENST00000410601 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-1100P-201ENST00000410691 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-860P-201ENST00000410860 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-1217P-201ENST00000411276 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-785P-201ENST00000411324 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RPS26P5-201ENST00000418544 335 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 AC067940.1-201ENST00000458411 300 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU7-185P-201ENST00000459215 60 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-589P-201ENST00000516485 107 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 U6.90-201ENST00000614007 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 U6.70-201ENST00000620287 104 ntBASIC1.43□□□□□ -2.18
SSRP1Q08945 RNU6-363P-201ENST00000362895 105 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 Y_RNA.85-201ENST00000363014 111 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 RNU4-67P-201ENST00000364569 141 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 RNU6-816P-201ENST00000390914 107 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 RNU6-1268P-201ENST00000391214 107 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 RNU6-1239P-201ENST00000391310 107 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 RPS29P28-201ENST00000446439 141 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 AC133485.1-201ENST00000567176 124 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 AC105081.1-201ENST00000617727 106 ntBASIC1.42□□□□□ -2.18
SSRP1Q08945 AL391516.1-201ENST00000554380 2449 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 RNU1-124P-201ENST00000363861 145 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 RNU6-215P-201ENST00000365169 102 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 Y_RNA.448-201ENST00000384185 108 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 SNORD20-201ENST00000384550 80 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 MIR200A-201ENST00000384875 90 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 SNORD93-201ENST00000408813 74 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 RNU6-521P-201ENST00000516663 105 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 Y_RNA.709-201ENST00000516952 92 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 MIR6504-201ENST00000613520 61 ntBASIC1.41□□□□□ -2.18
SSRP1Q08945 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SSRP1Q08945 RNU1-36P-201ENST00000365130 165 ntBASIC1.4□□□□□ -2.19
SSRP1Q08945 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
SSRP1Q08945 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
SSRP1Q08945 AC068339.1-201ENST00000526965 141 ntBASIC1.4□□□□□ -2.19
SSRP1Q08945 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
SSRP1Q08945 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
SSRP1Q08945 MIR1-1-201ENST00000362147 71 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 Y_RNA.155-201ENST00000363632 101 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 RNU6-1107P-201ENST00000364817 104 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 RNU6-409P-201ENST00000384114 104 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 RNU6-1321P-201ENST00000390905 107 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 AC015818.7-201ENST00000428754 109 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 FABP5P4-201ENST00000437203 171 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 AC087499.7-201ENST00000441958 109 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms