Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
LTBQ06643 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.24□□□□□ -2.21
LTBQ06643 RNU6-363P-201ENST00000362895 105 ntBASIC1.23□□□□□ -2.21
LTBQ06643 Y_RNA.309-201ENST00000365046 111 ntBASIC1.23□□□□□ -2.21
LTBQ06643 Y_RNA.328-201ENST00000365208 113 ntBASIC1.23□□□□□ -2.21
LTBQ06643 RNU6-756P-201ENST00000383997 107 ntBASIC1.23□□□□□ -2.21
LTBQ06643 MIR548J-201ENST00000408833 112 ntBASIC1.23□□□□□ -2.21
LTBQ06643 RNA5SP89-201ENST00000410300 108 ntBASIC1.23□□□□□ -2.21
LTBQ06643 SNORA19.1-201ENST00000410656 129 ntBASIC1.23□□□□□ -2.21
LTBQ06643 RPS27P16-201ENST00000425758 201 ntBASIC1.23□□□□□ -2.21
LTBQ06643 AL353813.1-201ENST00000440700 253 ntBASIC1.23□□□□□ -2.21
LTBQ06643 RPL39P25-201ENST00000449384 154 ntBASIC1.23□□□□□ -2.21
LTBQ06643 RPL39P39-201ENST00000455840 151 ntBASIC1.23□□□□□ -2.21
LTBQ06643 RNU7-35P-201ENST00000517174 62 ntBASIC1.23□□□□□ -2.21
LTBQ06643 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
LTBQ06643 SNORD114-27-201ENST00000363766 70 ntBASIC1.22□□□□□ -2.21
LTBQ06643 SNORA51.5-201ENST00000384126 131 ntBASIC1.22□□□□□ -2.21
LTBQ06643 MIR605-201ENST00000385078 83 ntBASIC1.22□□□□□ -2.21
LTBQ06643 SNORD77B-201ENST00000391112 67 ntBASIC1.22□□□□□ -2.21
LTBQ06643 MIR1302-5-201ENST00000408164 150 ntBASIC1.22□□□□□ -2.21
LTBQ06643 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
LTBQ06643 RNU7-79P-201ENST00000516082 62 ntBASIC1.22□□□□□ -2.21
LTBQ06643 RNU6-168P-201ENST00000516189 101 ntBASIC1.22□□□□□ -2.21
LTBQ06643 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
LTBQ06643 MIR6516-201ENST00000630554 81 ntBASIC1.22□□□□□ -2.21
LTBQ06643 RNA5SP264-201ENST00000363115 107 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU4-67P-201ENST00000364569 141 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-396P-201ENST00000365369 105 ntBASIC1.21□□□□□ -2.22
LTBQ06643 Y_RNA.495-201ENST00000384435 112 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-1065P-201ENST00000384513 106 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNY1P4-201ENST00000384595 115 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-679P-201ENST00000391003 106 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-1307P-201ENST00000391012 103 ntBASIC1.21□□□□□ -2.22
LTBQ06643 MIR1912-201ENST00000410389 80 ntBASIC1.21□□□□□ -2.22
LTBQ06643 SNORA7.5-201ENST00000410672 110 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-1086P-201ENST00000410930 100 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-109P-201ENST00000516364 107 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-184P-201ENST00000516514 107 ntBASIC1.21□□□□□ -2.22
LTBQ06643 RNU6-521P-201ENST00000516663 105 ntBASIC1.21□□□□□ -2.22
LTBQ06643 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
LTBQ06643 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
LTBQ06643 RNU6-766P-201ENST00000362478 107 ntBASIC1.2□□□□□ -2.22
LTBQ06643 Y_RNA.155-201ENST00000363632 101 ntBASIC1.2□□□□□ -2.22
LTBQ06643 RNU6-654P-201ENST00000364373 107 ntBASIC1.2□□□□□ -2.22
LTBQ06643 RNU6-409P-201ENST00000384114 104 ntBASIC1.2□□□□□ -2.22
LTBQ06643 Y_RNA.507-201ENST00000384500 99 ntBASIC1.2□□□□□ -2.22
LTBQ06643 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
LTBQ06643 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
LTBQ06643 RNA5SP95-201ENST00000410319 137 ntBASIC1.2□□□□□ -2.22
LTBQ06643 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.2□□□□□ -2.22
LTBQ06643 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.2□□□□□ -2.22
LTBQ06643 RPS29P23-201ENST00000458635 123 ntBASIC1.2□□□□□ -2.22
LTBQ06643 snoU13.2-201ENST00000459201 104 ntBASIC1.2□□□□□ -2.22
LTBQ06643 RPL30P7-201ENST00000479312 323 ntBASIC1.2□□□□□ -2.22
LTBQ06643 SNORD67.1-201ENST00000516618 108 ntBASIC1.2□□□□□ -2.22
LTBQ06643 RNU6-537P-201ENST00000517277 103 ntBASIC1.2□□□□□ -2.22
LTBQ06643 RN7SL793P-201ENST00000583259 296 ntBASIC1.2□□□□□ -2.22
LTBQ06643 FAM71BP1-201ENST00000604431 523 ntBASIC1.2□□□□□ -2.22
LTBQ06643 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LTBQ06643 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-1298P-201ENST00000362456 101 ntBASIC1.19□□□□□ -2.22
LTBQ06643 Y_RNA.360-201ENST00000365512 102 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-32P-201ENST00000383948 107 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-13P-201ENST00000384248 107 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-12P-201ENST00000384604 107 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-41P-201ENST00000384741 107 ntBASIC1.19□□□□□ -2.22
LTBQ06643 MIR588-201ENST00000384900 83 ntBASIC1.19□□□□□ -2.22
LTBQ06643 MIR590-201ENST00000385008 97 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-205P-201ENST00000390858 107 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-733P-201ENST00000410759 104 ntBASIC1.19□□□□□ -2.22
LTBQ06643 AC048334.1-201ENST00000477975 159 ntBASIC1.19□□□□□ -2.22
LTBQ06643 AC141557.1-201ENST00000540982 400 ntBASIC1.19□□□□□ -2.22
LTBQ06643 uc_338.6-201ENST00000613544 171 ntBASIC1.19□□□□□ -2.22
LTBQ06643 AC105081.1-201ENST00000617727 106 ntBASIC1.19□□□□□ -2.22
LTBQ06643 MIR6740-201ENST00000618268 113 ntBASIC1.19□□□□□ -2.22
LTBQ06643 RNU6-1099P-201ENST00000363533 107 ntBASIC1.18□□□□□ -2.22
LTBQ06643 RNY1P13-201ENST00000365030 105 ntBASIC1.18□□□□□ -2.22
LTBQ06643 SNORD115-35-201ENST00000365122 82 ntBASIC1.18□□□□□ -2.22
LTBQ06643 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
LTBQ06643 MIR206-201ENST00000384872 86 ntBASIC1.18□□□□□ -2.22
LTBQ06643 MIR577-201ENST00000385196 96 ntBASIC1.18□□□□□ -2.22
LTBQ06643 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
LTBQ06643 RNU7-2P-201ENST00000516096 62 ntBASIC1.18□□□□□ -2.22
LTBQ06643 RNU6-904P-201ENST00000516206 101 ntBASIC1.18□□□□□ -2.22
LTBQ06643 MIR2115-201ENST00000516657 100 ntBASIC1.18□□□□□ -2.22
LTBQ06643 AC141846.1-201ENST00000568348 142 ntBASIC1.18□□□□□ -2.22
LTBQ06643 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.18□□□□□ -2.22
LTBQ06643 AL662814.1-201ENST00000617364 121 ntBASIC1.18□□□□□ -2.22
LTBQ06643 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
LTBQ06643 Y_RNA.78-201ENST00000362970 110 ntBASIC1.17□□□□□ -2.22
LTBQ06643 MIR563-201ENST00000385080 79 ntBASIC1.17□□□□□ -2.22
LTBQ06643 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
LTBQ06643 UBL5P1-201ENST00000507979 193 ntBASIC1.17□□□□□ -2.22
LTBQ06643 RNA5SP436-201ENST00000516020 115 ntBASIC1.17□□□□□ -2.22
LTBQ06643 RNU7-137P-201ENST00000516788 62 ntBASIC1.17□□□□□ -2.22
LTBQ06643 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
LTBQ06643 RNU11-2P-201ENST00000516898 142 ntBASIC1.17□□□□□ -2.22
LTBQ06643 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
LTBQ06643 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
LTBQ06643 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms