Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC002350.1-201ENST00000490759 375 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 RNY4P20-201ENST00000516678 93 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 RNU6-448P-201ENST00000517052 107 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 MIR3668-201ENST00000582138 75 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 MIR6082-201ENST00000613604 109 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 AL137067.1-201ENST00000615933 120 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 Y_RNA.170-201ENST00000363746 110 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 Y_RNA.191-201ENST00000363972 113 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 Y_RNA.464-201ENST00000384282 110 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 MIR140-201ENST00000385282 100 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 Y_RNA.617-201ENST00000410920 90 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 Y_RNA.692-201ENST00000516627 105 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 AP001328.1-201ENST00000528550 176 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 MIR3121-201ENST00000579680 77 ntBASIC0.57□□□□□ -2.32
CX3CL1P78423 RNU4-69P-201ENST00000410677 143 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 SNORD67.1-201ENST00000516618 108 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 SNORA25.16-201ENST00000516741 121 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 RNU7-137P-201ENST00000516788 62 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 RNU6-1212P-201ENST00000517023 104 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 AC022523.2-201ENST00000561045 150 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 MIR4452-201ENST00000583004 71 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 AL359881.1-201ENST00000602916 267 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 AP001340.1-201ENST00000624405 217 ntBASIC0.56□□□□□ -2.32
CX3CL1P78423 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
CX3CL1P78423 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
CX3CL1P78423 RPS29P1-201ENST00000465274 159 ntBASIC0.55□□□□□ -2.32
CX3CL1P78423 RNU6-765P-201ENST00000516916 99 ntBASIC0.55□□□□□ -2.32
CX3CL1P78423 IGKV1-22-201ENST00000524313 326 ntBASIC0.55□□□□□ -2.32
CX3CL1P78423 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
CX3CL1P78423 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
CX3CL1P78423 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.55□□□□□ -2.32
CX3CL1P78423 Y_RNA.294-201ENST00000364916 102 ntBASIC0.54□□□□□ -2.32
CX3CL1P78423 Y_RNA.299-201ENST00000364973 94 ntBASIC0.54□□□□□ -2.32
CX3CL1P78423 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CX3CL1P78423 RNU6-907P-201ENST00000390924 102 ntBASIC0.54□□□□□ -2.32
CX3CL1P78423 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.54□□□□□ -2.32
CX3CL1P78423 RNU7-200P-201ENST00000516105 62 ntBASIC0.54□□□□□ -2.32
CX3CL1P78423 RNU6-426P-201ENST00000516464 97 ntBASIC0.54□□□□□ -2.32
CX3CL1P78423 Y_RNA.114-201ENST00000363265 113 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 RNA5SP117-201ENST00000365294 118 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 Y_RNA.488-201ENST00000384403 102 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 RNU6-1104P-201ENST00000384723 104 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 MIR499A-201ENST00000384903 122 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 RNA5SP272-201ENST00000516095 111 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 RNU6-255P-201ENST00000516957 105 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 AC133485.1-201ENST00000567176 124 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 AC138907.6-201ENST00000568401 126 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 U7.2-201ENST00000607576 63 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 U6.109-201ENST00000636749 87 ntBASIC0.53□□□□□ -2.32
CX3CL1P78423 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CX3CL1P78423 RNA5SP133-201ENST00000363368 119 ntBASIC0.52□□□□□ -2.33
CX3CL1P78423 SNORD114-10-201ENST00000363409 72 ntBASIC0.52□□□□□ -2.33
CX3CL1P78423 Y_RNA.280-201ENST00000364765 112 ntBASIC0.52□□□□□ -2.33
CX3CL1P78423 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
CX3CL1P78423 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.52□□□□□ -2.33
CX3CL1P78423 AC105081.1-201ENST00000617727 106 ntBASIC0.52□□□□□ -2.33
CX3CL1P78423 Y_RNA.32-201ENST00000362589 110 ntBASIC0.51□□□□□ -2.33
CX3CL1P78423 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.51□□□□□ -2.33
CX3CL1P78423 Y_RNA.676-201ENST00000516393 96 ntBASIC0.51□□□□□ -2.33
CX3CL1P78423 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
CX3CL1P78423 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
CX3CL1P78423 AC138749.4-201ENST00000563970 127 ntBASIC0.51□□□□□ -2.33
CX3CL1P78423 MTND5P34-201ENST00000568888 325 ntBASIC0.51□□□□□ -2.33
CX3CL1P78423 MIR3678-201ENST00000578455 94 ntBASIC0.51□□□□□ -2.33
CX3CL1P78423 RNU6-647P-201ENST00000364243 107 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 RNU6-209P-201ENST00000384118 107 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 RNU6-291P-201ENST00000384720 107 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CX3CL1P78423 SNORD77B-201ENST00000391112 67 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 MIR548I1-201ENST00000408810 149 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 RNU6-531P-201ENST00000516694 104 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 Y_RNA.697-201ENST00000516776 113 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 DEFB131E-201ENST00000532329 154 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 MIR6788-201ENST00000618842 66 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 uc_338.16-201ENST00000621804 95 ntBASIC0.5□□□□□ -2.33
CX3CL1P78423 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CX3CL1P78423 RNU4-58P-201ENST00000363192 141 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 Y_RNA.506-201ENST00000384494 102 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 Y_RNA.536-201ENST00000384621 113 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 MIR206-201ENST00000384872 86 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 MIR644A-201ENST00000385262 94 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 RNU6-679P-201ENST00000391003 106 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 MIR548J-201ENST00000408833 112 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 RN7SKP19-201ENST00000516016 252 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 RNU6-1194P-201ENST00000516208 104 ntBASIC0.49□□□□□ -2.33
CX3CL1P78423 RNY1P5-201ENST00000383890 115 ntBASIC0.48□□□□□ -2.33
CX3CL1P78423 RNU6-535P-201ENST00000384722 107 ntBASIC0.48□□□□□ -2.33
CX3CL1P78423 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
CX3CL1P78423 SNORA31.14-201ENST00000516728 116 ntBASIC0.48□□□□□ -2.33
CX3CL1P78423 AC092634.7-201ENST00000621022 103 ntBASIC0.48□□□□□ -2.33
CX3CL1P78423 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.48□□□□□ -2.33
CX3CL1P78423 Y_RNA.174-201ENST00000363781 105 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 Y_RNA.224-201ENST00000364308 111 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 1028.2 ms