Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RN7SKP19-201ENST00000516016 252 ntBASIC-0.59□□□□□ -2.5
CLDN6P56747 RNU7-161P-201ENST00000517289 62 ntBASIC-0.59□□□□□ -2.5
CLDN6P56747 CR383656.4-201ENST00000546909 122 ntBASIC-0.59□□□□□ -2.5
CLDN6P56747 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.59□□□□□ -2.5
CLDN6P56747 MIR1302-2-201ENST00000607096 138 ntBASIC-0.59□□□□□ -2.5
CLDN6P56747 AC090574.1-201ENST00000623186 233 ntBASIC-0.59□□□□□ -2.5
CLDN6P56747 U6.109-201ENST00000636749 87 ntBASIC-0.59□□□□□ -2.5
CLDN6P56747 RNU4-16P-201ENST00000364737 141 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 RNU6-326P-201ENST00000365480 107 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.6□□□□□ -2.51
CLDN6P56747 SNORA27.4-201ENST00000516650 95 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 AL132765.2-201ENST00000610812 351 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 AC093783.1-201ENST00000612976 329 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 U6atac.1-201ENST00000616025 117 ntBASIC-0.6□□□□□ -2.51
CLDN6P56747 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.61□□□□□ -2.51
CLDN6P56747 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 RNA5SP192-201ENST00000364404 120 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 SNORA63.7-201ENST00000365579 123 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 RNU4-70P-201ENST00000384579 139 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 MT-TT-201ENST00000387460 66 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.61□□□□□ -2.51
CLDN6P56747 RNU6-893P-201ENST00000458841 100 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 RNU7-79P-201ENST00000516082 62 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
CLDN6P56747 RNU6-86P-201ENST00000606534 107 ntBASIC-0.61□□□□□ -2.51
CLDN6P56747 MIR148A-201ENST00000362215 68 ntBASIC-0.62□□□□□ -2.51
CLDN6P56747 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.62□□□□□ -2.51
CLDN6P56747 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
CLDN6P56747 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
CLDN6P56747 RNU6-721P-201ENST00000410155 105 ntBASIC-0.62□□□□□ -2.51
CLDN6P56747 RNU6-881P-201ENST00000516813 102 ntBASIC-0.62□□□□□ -2.51
CLDN6P56747 MIR4263-201ENST00000584745 83 ntBASIC-0.62□□□□□ -2.51
CLDN6P56747 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.63□□□□□ -2.51
CLDN6P56747 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.63□□□□□ -2.51
CLDN6P56747 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.63□□□□□ -2.51
CLDN6P56747 RNU6-274P-201ENST00000459566 107 ntBASIC-0.63□□□□□ -2.51
CLDN6P56747 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.63□□□□□ -2.51
CLDN6P56747 AC084368.1-201ENST00000620935 65 ntBASIC-0.63□□□□□ -2.51
CLDN6P56747 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.63□□□□□ -2.51
CLDN6P56747 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 RNU6-226P-201ENST00000363778 107 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 U8.6-201ENST00000364939 135 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 RNU6-211P-201ENST00000384047 107 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 RNU6-24P-201ENST00000384440 107 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 AL606845.1-201ENST00000404881 255 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 AC138393.2-201ENST00000414742 246 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 AC006210.1-201ENST00000424882 111 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 MIR4320-201ENST00000636981 65 ntBASIC-0.64□□□□□ -2.51
CLDN6P56747 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 SNORD41.1-201ENST00000391000 69 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 MIR8485-201ENST00000401372 91 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 SNORD110-201ENST00000408189 75 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 RNA5SP33-201ENST00000516687 98 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.65□□□□□ -2.51
CLDN6P56747 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.65□□□□□ -2.51
CLDN6P56747 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 RNA5SP403-201ENST00000363598 108 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 RNU6-121P-201ENST00000410525 99 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 SCARNA18B-201ENST00000458806 135 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.66□□□□□ -2.52
CLDN6P56747 SNORD38.3-201ENST00000516599 73 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 RNU6-158P-201ENST00000517104 100 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 RNA5SP66-201ENST00000517178 101 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 MIR3165-201ENST00000579874 75 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 AC105081.1-201ENST00000617727 106 ntBASIC-0.66□□□□□ -2.52
CLDN6P56747 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 RNU6-431P-201ENST00000383874 107 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 MIR876-201ENST00000401147 81 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 SNORA79-201ENST00000408376 140 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 AL445193.1-201ENST00000441183 141 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 RNU7-35P-201ENST00000517174 62 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 MIR548H5-201ENST00000580314 60 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 AL365205.2-201ENST00000594586 68 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 AL356055.1-201ENST00000602528 446 ntBASIC-0.67□□□□□ -2.52
CLDN6P56747 UBE2WP1-201ENST00000362030 340 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 SNORD64-201ENST00000386683 67 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 RNU6-453P-201ENST00000516819 85 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
CLDN6P56747 MIR4280-201ENST00000582178 76 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 MIR4306-201ENST00000583390 91 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 AC098479.1-201ENST00000609225 154 ntBASIC-0.68□□□□□ -2.52
CLDN6P56747 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.69□□□□□ -2.52
CLDN6P56747 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 1324.8 ms