Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
CDH12P55289 MIR548D2-201ENST00000384955 97 ntBASIC0.93□□□□□ -2.26
CDH12P55289 RNU6-1154P-201ENST00000391001 104 ntBASIC0.93□□□□□ -2.26
CDH12P55289 MIR1257-201ENST00000408490 117 ntBASIC0.93□□□□□ -2.26
CDH12P55289 SNORD93-201ENST00000408813 74 ntBASIC0.93□□□□□ -2.26
CDH12P55289 Y_RNA.649-201ENST00000459077 103 ntBASIC0.93□□□□□ -2.26
CDH12P55289 AC108729.3-201ENST00000513484 108 ntBASIC0.93□□□□□ -2.26
CDH12P55289 MIR4804-201ENST00000581683 73 ntBASIC0.93□□□□□ -2.26
CDH12P55289 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
CDH12P55289 AC105081.1-201ENST00000617727 106 ntBASIC0.93□□□□□ -2.26
CDH12P55289 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
CDH12P55289 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.92□□□□□ -2.26
CDH12P55289 SNORD114-10-201ENST00000363409 72 ntBASIC0.92□□□□□ -2.26
CDH12P55289 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CDH12P55289 MIR125B2-201ENST00000385128 89 ntBASIC0.92□□□□□ -2.26
CDH12P55289 RNU6-1307P-201ENST00000391012 103 ntBASIC0.92□□□□□ -2.26
CDH12P55289 Y_RNA.588-201ENST00000391254 102 ntBASIC0.92□□□□□ -2.26
CDH12P55289 RPL39P25-201ENST00000449384 154 ntBASIC0.92□□□□□ -2.26
CDH12P55289 U7.7-201ENST00000459276 60 ntBASIC0.92□□□□□ -2.26
CDH12P55289 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
CDH12P55289 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.92□□□□□ -2.26
CDH12P55289 RNU6-1110P-201ENST00000516462 101 ntBASIC0.92□□□□□ -2.26
CDH12P55289 MIR1255B1-201ENST00000636325 63 ntBASIC0.92□□□□□ -2.26
CDH12P55289 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CDH12P55289 RNY4P6-201ENST00000363667 96 ntBASIC0.91□□□□□ -2.26
CDH12P55289 MIR206-201ENST00000384872 86 ntBASIC0.91□□□□□ -2.26
CDH12P55289 MIR548A1-201ENST00000385041 97 ntBASIC0.91□□□□□ -2.26
CDH12P55289 RNU2-51P-201ENST00000410708 197 ntBASIC0.91□□□□□ -2.26
CDH12P55289 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.91□□□□□ -2.26
CDH12P55289 PDCD5P2-201ENST00000507570 312 ntBASIC0.91□□□□□ -2.26
CDH12P55289 RNU6-313P-201ENST00000516317 112 ntBASIC0.91□□□□□ -2.26
CDH12P55289 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
CDH12P55289 RNU6-977P-201ENST00000516411 103 ntBASIC0.91□□□□□ -2.26
CDH12P55289 MIR4491-201ENST00000581087 68 ntBASIC0.91□□□□□ -2.26
CDH12P55289 snoU13.31-201ENST00000607291 104 ntBASIC0.91□□□□□ -2.26
CDH12P55289 RMST_2.1-201ENST00000617263 136 ntBASIC0.91□□□□□ -2.26
CDH12P55289 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
CDH12P55289 Y_RNA.338-201ENST00000365320 114 ntBASIC0.9□□□□□ -2.27
CDH12P55289 Y_RNA.362-201ENST00000365518 110 ntBASIC0.9□□□□□ -2.27
CDH12P55289 MIR548A3-201ENST00000385297 97 ntBASIC0.9□□□□□ -2.27
CDH12P55289 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CDH12P55289 RNU6-1321P-201ENST00000390905 107 ntBASIC0.9□□□□□ -2.27
CDH12P55289 RNU7-56P-201ENST00000458744 62 ntBASIC0.9□□□□□ -2.27
CDH12P55289 AL670379.3-201ENST00000605040 251 ntBASIC0.9□□□□□ -2.27
CDH12P55289 AL035470.1-201ENST00000622571 220 ntBASIC0.9□□□□□ -2.27
CDH12P55289 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
CDH12P55289 RNU6-53P-201ENST00000365367 106 ntBASIC0.89□□□□□ -2.27
CDH12P55289 MIR520F-201ENST00000384824 87 ntBASIC0.89□□□□□ -2.27
CDH12P55289 MIR938-201ENST00000401216 83 ntBASIC0.89□□□□□ -2.27
CDH12P55289 RNU4-83P-201ENST00000410863 133 ntBASIC0.89□□□□□ -2.27
CDH12P55289 RNU7-2P-201ENST00000516096 62 ntBASIC0.89□□□□□ -2.27
CDH12P55289 RNU7-156P-201ENST00000517214 74 ntBASIC0.89□□□□□ -2.27
CDH12P55289 AC007012.1-201ENST00000567192 175 ntBASIC0.89□□□□□ -2.27
CDH12P55289 MIR8066-201ENST00000617280 78 ntBASIC0.89□□□□□ -2.27
CDH12P55289 RNU6-403P-201ENST00000363163 104 ntBASIC0.88□□□□□ -2.27
CDH12P55289 SNORD115-35-201ENST00000365122 82 ntBASIC0.88□□□□□ -2.27
CDH12P55289 Y_RNA.327-201ENST00000365201 102 ntBASIC0.88□□□□□ -2.27
CDH12P55289 Y_RNA.448-201ENST00000384185 108 ntBASIC0.88□□□□□ -2.27
CDH12P55289 Y_RNA.549-201ENST00000384657 102 ntBASIC0.88□□□□□ -2.27
CDH12P55289 RNU7-102P-201ENST00000458948 62 ntBASIC0.88□□□□□ -2.27
CDH12P55289 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
CDH12P55289 SNORA25.16-201ENST00000516741 121 ntBASIC0.88□□□□□ -2.27
CDH12P55289 AC138749.4-201ENST00000563970 127 ntBASIC0.88□□□□□ -2.27
CDH12P55289 SNORD92-201ENST00000585078 85 ntBASIC0.88□□□□□ -2.27
CDH12P55289 AC008608.1-201ENST00000603910 127 ntBASIC0.88□□□□□ -2.27
CDH12P55289 AL136317.1-201ENST00000612653 226 ntBASIC0.88□□□□□ -2.27
CDH12P55289 Y_RNA.42-201ENST00000362660 108 ntBASIC0.87□□□□□ -2.27
CDH12P55289 RNU6-364P-201ENST00000384387 107 ntBASIC0.87□□□□□ -2.27
CDH12P55289 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
CDH12P55289 MTND5P34-201ENST00000568888 325 ntBASIC0.87□□□□□ -2.27
CDH12P55289 MIR4679-2-201ENST00000578358 77 ntBASIC0.87□□□□□ -2.27
CDH12P55289 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.87□□□□□ -2.27
CDH12P55289 U6.109-201ENST00000636749 87 ntBASIC0.87□□□□□ -2.27
CDH12P55289 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CDH12P55289 Y_RNA.13-201ENST00000362403 112 ntBASIC0.86□□□□□ -2.27
CDH12P55289 RNA5SP133-201ENST00000363368 119 ntBASIC0.86□□□□□ -2.27
CDH12P55289 RNU6-1144P-201ENST00000384247 104 ntBASIC0.86□□□□□ -2.27
CDH12P55289 MIR520H-201ENST00000385126 88 ntBASIC0.86□□□□□ -2.27
CDH12P55289 RNU6-521P-201ENST00000516663 105 ntBASIC0.86□□□□□ -2.27
CDH12P55289 AC133485.1-201ENST00000567176 124 ntBASIC0.86□□□□□ -2.27
CDH12P55289 MIR6082-201ENST00000613604 109 ntBASIC0.86□□□□□ -2.27
CDH12P55289 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-363P-201ENST00000362895 105 ntBASIC0.85□□□□□ -2.27
CDH12P55289 SNORA72.6-201ENST00000384520 129 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-476P-201ENST00000384726 107 ntBASIC0.85□□□□□ -2.27
CDH12P55289 MIR548I2-201ENST00000408348 149 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-447P-201ENST00000410293 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-1118P-201ENST00000410382 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-1076P-201ENST00000410397 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-355P-201ENST00000410427 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-791P-201ENST00000410467 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-705P-201ENST00000410601 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-1064P-201ENST00000410626 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-1100P-201ENST00000410691 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-860P-201ENST00000410860 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-1217P-201ENST00000411276 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU6-785P-201ENST00000411324 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 AL353813.1-201ENST00000440700 253 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNU7-48P-201ENST00000458875 63 ntBASIC0.85□□□□□ -2.27
CDH12P55289 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms