Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.588-201ENST00000391254 102 ntBASIC0.71□□□□□ -2.3
CDH11P55287 MIR938-201ENST00000401216 83 ntBASIC0.71□□□□□ -2.3
CDH11P55287 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
CDH11P55287 RNU7-79P-201ENST00000516082 62 ntBASIC0.71□□□□□ -2.3
CDH11P55287 AC008608.1-201ENST00000603910 127 ntBASIC0.71□□□□□ -2.3
CDH11P55287 RNU6-1104P-201ENST00000384723 104 ntBASIC0.7□□□□□ -2.3
CDH11P55287 MIR1257-201ENST00000408490 117 ntBASIC0.7□□□□□ -2.3
CDH11P55287 RNY4P20-201ENST00000516678 93 ntBASIC0.7□□□□□ -2.3
CDH11P55287 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
CDH11P55287 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
CDH11P55287 U7.2-201ENST00000607576 63 ntBASIC0.7□□□□□ -2.3
CDH11P55287 MIR8066-201ENST00000617280 78 ntBASIC0.7□□□□□ -2.3
CDH11P55287 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
CDH11P55287 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
CDH11P55287 Y_RNA.42-201ENST00000362660 108 ntBASIC0.69□□□□□ -2.3
CDH11P55287 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
CDH11P55287 MIR520H-201ENST00000385126 88 ntBASIC0.69□□□□□ -2.3
CDH11P55287 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CDH11P55287 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
CDH11P55287 Y_RNA.617-201ENST00000410920 90 ntBASIC0.69□□□□□ -2.3
CDH11P55287 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
CDH11P55287 MTND4LP9-201ENST00000427694 174 ntBASIC0.69□□□□□ -2.3
CDH11P55287 RNU7-102P-201ENST00000458948 62 ntBASIC0.69□□□□□ -2.3
CDH11P55287 AC022523.2-201ENST00000561045 150 ntBASIC0.69□□□□□ -2.3
CDH11P55287 AC090897.1-201ENST00000580909 226 ntBASIC0.69□□□□□ -2.3
CDH11P55287 AL359881.1-201ENST00000602916 267 ntBASIC0.69□□□□□ -2.3
CDH11P55287 RNU6-1062P-201ENST00000383908 107 ntBASIC0.68□□□□□ -2.3
CDH11P55287 SNORA32-201ENST00000384072 121 ntBASIC0.68□□□□□ -2.3
CDH11P55287 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
CDH11P55287 RNU6-257P-201ENST00000410238 98 ntBASIC0.68□□□□□ -2.3
CDH11P55287 RN7SKP19-201ENST00000516016 252 ntBASIC0.68□□□□□ -2.3
CDH11P55287 RNU7-156P-201ENST00000517214 74 ntBASIC0.68□□□□□ -2.3
CDH11P55287 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.68□□□□□ -2.3
CDH11P55287 MIR4491-201ENST00000581087 68 ntBASIC0.68□□□□□ -2.3
CDH11P55287 MT-TI-201ENST00000387365 69 ntBASIC0.67□□□□□ -2.3
CDH11P55287 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.67□□□□□ -2.3
CDH11P55287 SNORD93-201ENST00000408813 74 ntBASIC0.67□□□□□ -2.3
CDH11P55287 RNU4-69P-201ENST00000410677 143 ntBASIC0.67□□□□□ -2.3
CDH11P55287 AL158147.1-201ENST00000443970 75 ntBASIC0.67□□□□□ -2.3
CDH11P55287 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
CDH11P55287 RNU5E-3P-201ENST00000515913 68 ntBASIC0.67□□□□□ -2.3
CDH11P55287 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
CDH11P55287 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
CDH11P55287 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
CDH11P55287 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-647P-201ENST00000364243 107 ntBASIC0.66□□□□□ -2.3
CDH11P55287 Y_RNA.299-201ENST00000364973 94 ntBASIC0.66□□□□□ -2.3
CDH11P55287 MIR613-201ENST00000385248 95 ntBASIC0.66□□□□□ -2.3
CDH11P55287 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CDH11P55287 SNORD100-201ENST00000408573 76 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-447P-201ENST00000410293 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-1118P-201ENST00000410382 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-1076P-201ENST00000410397 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-355P-201ENST00000410427 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-791P-201ENST00000410467 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-705P-201ENST00000410601 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-1100P-201ENST00000410691 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-860P-201ENST00000410860 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU4-83P-201ENST00000410863 133 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-1217P-201ENST00000411276 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU6-785P-201ENST00000411324 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 SNORD67.1-201ENST00000516618 108 ntBASIC0.66□□□□□ -2.3
CDH11P55287 RNU7-137P-201ENST00000516788 62 ntBASIC0.66□□□□□ -2.3
CDH11P55287 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
CDH11P55287 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.66□□□□□ -2.3
CDH11P55287 U6.90-201ENST00000614007 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 U6.70-201ENST00000620287 104 ntBASIC0.66□□□□□ -2.3
CDH11P55287 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
CDH11P55287 AL589743.1-201ENST00000551932 2712 ntBASIC0.65□□□□□ -2.31
CDH11P55287 Y_RNA.343-201ENST00000365354 112 ntBASIC0.65□□□□□ -2.31
CDH11P55287 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
CDH11P55287 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
CDH11P55287 MIR598-201ENST00000384868 97 ntBASIC0.65□□□□□ -2.31
CDH11P55287 MIRLET7F2-201ENST00000385277 83 ntBASIC0.65□□□□□ -2.31
CDH11P55287 Y_RNA.13-201ENST00000362403 112 ntBASIC0.64□□□□□ -2.31
CDH11P55287 SNORD114-10-201ENST00000363409 72 ntBASIC0.64□□□□□ -2.31
CDH11P55287 SNORD50.2-201ENST00000365465 70 ntBASIC0.64□□□□□ -2.31
CDH11P55287 RNU6-364P-201ENST00000384387 107 ntBASIC0.64□□□□□ -2.31
CDH11P55287 Y_RNA.586-201ENST00000391146 98 ntBASIC0.64□□□□□ -2.31
CDH11P55287 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
CDH11P55287 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
CDH11P55287 MIR6082-201ENST00000613604 109 ntBASIC0.64□□□□□ -2.31
CDH11P55287 TUG1_4.1-201ENST00000619464 181 ntBASIC0.64□□□□□ -2.31
CDH11P55287 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CDH11P55287 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
CDH11P55287 RNU6-746P-201ENST00000384112 109 ntBASIC0.63□□□□□ -2.31
CDH11P55287 SNORA40-201ENST00000388090 126 ntBASIC0.63□□□□□ -2.31
CDH11P55287 RNU6-781P-201ENST00000516377 101 ntBASIC0.63□□□□□ -2.31
CDH11P55287 Y_RNA.703-201ENST00000516846 111 ntBASIC0.63□□□□□ -2.31
CDH11P55287 RNU6-765P-201ENST00000516916 99 ntBASIC0.63□□□□□ -2.31
CDH11P55287 MIR3612-201ENST00000579753 87 ntBASIC0.63□□□□□ -2.31
CDH11P55287 MIR3133-201ENST00000583157 78 ntBASIC0.63□□□□□ -2.31
CDH11P55287 PVT1_3.1-201ENST00000620853 95 ntBASIC0.63□□□□□ -2.31
CDH11P55287 RNU6-448P-201ENST00000517052 107 ntBASIC0.62□□□□□ -2.31
CDH11P55287 AP003327.1-201ENST00000529684 127 ntBASIC0.62□□□□□ -2.31
CDH11P55287 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
CDH11P55287 AC087741.2-201ENST00000619415 172 ntBASIC0.62□□□□□ -2.31
CDH11P55287 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.62□□□□□ -2.31
CDH11P55287 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
CDH11P55287 RNU6-403P-201ENST00000363163 104 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms